Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02145 ATGTGCAGCATCAGTGAGAAAGCCAAAAGGAAGCGCCAATCTgcattccgcggagtgcgcaaacgcagctggggacgctacgtctctgagataaggctcccgggccagaaaacacgcatatggctcggctccttcggctcgcctgagatggcggctcgcgcttatgactccgctgctttcttcctcaaaggaacatctgccactcttaatttccccgacctcgtacactccctgcctcgacctctctcatcttcccggagggacatacagtccgccgcagctgaagccgcTCTCCACTCTCCGCCTCCCAAAGAAGAACAAGAATCTATTTTCACTTCCACCACCACCTCGTCCTTTCACGATGTCATGGAAGCTCCTCTTATGAGTCCCCTTAGGGTGGACTCCACTTTCGGAGATTTCTCATGGGACCAACTCTTCGATTTCAACGATGACATTCTCATCGTGGGATCAACTTCTGCCACTCTTGTCCCTTAA 495 0.2384 MCSISEKAKRKRQSAFRGVRKRSWGRYVSEIRLPGQKTRIWLGSFGSPEMAARAYDSAAFFLKGTSATLNFPDLVHSLPRPLSSSRRDIQSAAAEAALHSPPPKEEQESIFTSTTTSSFHDVMEAPLMSPLRVDSTFGDFSWDQLFDFNDDILIVGSTSATLVP 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02145 164 Gene3D AP2/ERF domain 15 73 IPR036955 GO:0003700|GO:0006355
Gma09g02145 164 ProSiteProfiles AP2/ERF domain profile. 15 72 IPR001471 GO:0003700|GO:0006355
Gma09g02145 164 Pfam AP2 domain 15 64 IPR001471 GO:0003700|GO:0006355
Gma09g02145 164 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF036-LIKE 7 114 - -
Gma09g02145 164 MobiDBLite consensus disorder prediction 80 113 - -
Gma09g02145 164 CDD AP2 14 74 IPR001471 GO:0003700|GO:0006355
Gma09g02145 164 SUPERFAMILY DNA-binding domain 14 73 IPR016177 GO:0003677
Gma09g02145 164 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Gma09g02145 164 PRINTS Ethylene responsive element binding protein signature 54 74 IPR001471 GO:0003700|GO:0006355
Gma09g02145 164 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 114 - -
Gma09g02145 164 SMART rav1_2 15 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02145 Gma-Chr9 46924625 46925246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02145 6 101 AP2-EREBP Transcription Factor Family AT5G11590 59.000 6.90e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma09g02145 AP2 2.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02145 K09286 - gmx:100783790 295.819