Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02143 ATGGGTTCGTCGACTAATGGTGGTGTGCCGCCAGGGTTTAGATTTCATCCAACGGATGAAGAGCTGCTTCATTACTACTTGAAGAAGAAGGTGTCCTTTCAGAAGTTTGACATGGATGTCATTAGAGAGGTCGACTTGAACAAGATGGAGCCTTGGGACTTGCAAGAAAGATGTAGAATTGGATCTACTCCACAAAACGAGTGGTATTTCTTCAGTCACAAGGATAGAAAGTACCCTACAGGTTCAAGGACTAATAGAGCAACGAACGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAGTGCATTAGGAATAGCTTCAAGAAGATTGGAATGAGAAAAACCCTTGTGTTTTACAAAGGAAGAGCTCCTCATGGACAAAAGACTGATTGGATCATGCATGAGTACCGCCTAGAAGATGGCAATGATCCTCAAGGAAGTGCCAATGAAGATGGCTGGGTGGTGTGCAGAGTGTTCAAGAAGAAGAATTTATTCAAGATTGAAAATGAAGGTGGGTCTACACATAAACCAGATCACCAAATCAACAATTCTTCAAACACTAATGCACGGTCCTATAGAGAAAATCACTACTTACTACATCAACAGCAAAATCCTAGGAACTCATCAGGGCTTGAGCTTGATAAGCCTGAGCTGGCTCTCCATTACCCGCCGCCACACTTGCAAAACCCTCCATACTCACTCTTCCAATCCCAGCCTCTTCTTCAGACCCAAAAGCCTATGGTTTATGATTATTCATATACATCAGACACCCCTATCATGGCAAAGCAACTCATGACAAACCCTAGAGACTGTGAGAGCGGCAGTGATGGCCTAAGATATCAAGTTTCGGAGTCAGGTATGGAAGTTGGGTCGTGTGAACCAAATCAAGAAATGGGAACCGGAAGAGGTGAAGGAATAAACGAATGGGGTGTTCTTGATAGGCTAGTGACCTCTCATCTTGCTGGAAATGAGGACTCATCCAAAGGGGTCAGGTTTGAAGAGGCAAATCCACAGTCTGTCCACCAGATCAATCAACTTTCATTGCGGGGAGAGATGGACTTCTGGGCCTATGGAAAACAATGA 1080 0.4435 MGSSTNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSFKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDGNDPQGSANEDGWVVCRVFKKKNLFKIENEGGSTHKPDHQINNSSNTNARSYRENHYLLHQQQNPRNSSGLELDKPELALHYPPPHLQNPPYSLFQSQPLLQTQKPMVYDYSYTSDTPIMAKQLMTNPRDCESGSDGLRYQVSESGMEVGSCEPNQEMGTGRGEGINEWGVLDRLVTSHLAGNEDSSKGVRFEEANPQSVHQINQLSLRGEMDFWAYGKQ 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02143 359 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Gma09g02143 359 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Gma09g02143 359 PANTHER PROTEIN BEARSKIN2-LIKE 5 270 IPR033519 -
Gma09g02143 359 ProSiteProfiles NAC domain profile. 9 160 IPR003441 GO:0003677|GO:0006355
Gma09g02143 359 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 270 - -
Gma09g02143 359 SUPERFAMILY NAC domain 8 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02143 Gma-Chr9 46912817 46915823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02143 3 353 NAC Transcription Factor Family AT1G33280 54.875 1.11e-120 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma09g02143 NAM 3.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02143 - - gmx:100775746 763.066