Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02122 ATGAATACTTTTACTCATGTCCCCCCCGGTTTCAGGTTCCATCCTACGGATGAAGAACTTGTTGATTACTACCTTAGGAAGAAAATTGCTTCAAGGAGGATTGATCTAGATGTGATAAAAGATGTTGACCTCTACAAAATTGAGCCATGGGATCTTCAAGAGATTTGCAGAATAGGAGCAGAAGAGCAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACTGGAACTCGCACAAATAGAGCAACTGCAGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAGGCAATCTATTCCAAGCACGAGCTGATAGGCATGAGGAAAACCTTAGTCTTTTATAAAGGTCGAGCTCCAAATGGACAAAAGTCAGATTGGATAATGCACGAGTATCGGCTTGAAACAGATGAAAATGGCACTCCACAGGCAAAAGGATGGGTTGTGTGTAGAGTATTCAAGAAGAGAGTAACAACCATGCGTAAAGTGAGTGAGCATGACTCCTCCTGTTGGTATGATGAGCAAGTCTCTTTCATGCAAGACTTGGACTCACCAAAGCAAACTTGTCAATCTAATTTGGTCTACCAGCAGCTACCATATCCTTGCAAGAAAGAGCTAGATTTGCCGCCATACCAATTGCCTCGTGACCACTTCCTCCAGCTTCCACTTCTAGAGAGCCCAAAACTGCTTCAATCTGCTTCTGCCATAGCACCTATTAATAATCCCATGGAAGGATATGTTCTAGACCATGTAAACCACTCAACTTCTCTGCTTCCCCCATCACTCATACAACAAGAACATGTTGGTCAGCAAAACTTTCAGGCAACCTATGGCAACATTAACAATTCCAATGAACAAGCAGTGGATCCAGTGACTGATTGGCGAGTGCTTGACAAGTTTGTTGCTTCACAACTTAGTCAAGATGCTTCCAAAGAAAATATCTTTCAAGGCACGGACAATAGCAGTGTACAGTTCAGACATTTGGACAAACAAAAGCTAGTGGTGCCTGAACAAAATGCATCAACATCAAACTCCAGCTGCCCAATTGATTTGTGGAAATAG 1065 0.4225 MNTFTHVPPGFRFHPTDEELVDYYLRKKIASRRIDLDVIKDVDLYKIEPWDLQEICRIGAEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHELIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQAKGWVVCRVFKKRVTTMRKVSEHDSSCWYDEQVSFMQDLDSPKQTCQSNLVYQQLPYPCKKELDLPPYQLPRDHFLQLPLLESPKLLQSASAIAPINNPMEGYVLDHVNHSTSLLPPSLIQQEHVGQQNFQATYGNINNSNEQAVDPVTDWRVLDKFVASQLSQDASKENIFQGTDNSSVQFRHLDKQKLVVPEQNASTSNSSCPIDLWK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02122 354 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Gma09g02122 354 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Gma09g02122 354 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Gma09g02122 354 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 335 - -
Gma09g02122 354 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Gma09g02122 354 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02122 Gma-Chr9 46778870 46780679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02122 1 354 NAC Transcription Factor Family AT1G12260 56.403 1.43e-135 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma09g02122 NAM 2.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02122 - - gmx:100815845 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02122 09 46778870 46780679 Gma09g02122 09 46778870 46780679 ECH