Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02119 ATGGACTTGAAGTCGAATCATACTCCTGTTCTCACTGATGCTGCACCTGTAACAAAGTCTAGACTGGGTGTGCATTCCAGTTTGTTGCCTTACTCCCATACTGGGACAACCTTTACACATGGAATGTTATTGACTATCCCGAGGAAGAAGACAGGAATTCTTGAAGATGTTCGTTGTAGTGGTTGGTTGGATGCCATGAAATCATCTTCACCTCCAGCCAGGAAGATAACAAAGGATGTTGGTCTTGGGTTTGCATCATCTGATTCTGATACTGCTGGTGCTTATTTTAGCTGGCTGCTAAAATACCCATCAGCACTTACATCTTTTGATCAAATCACAAACTATGCAAAAGGGAAAAGAATTGCGTTGTTTATGGATTATGATGGAACTCTTTCACCGATTGTGGATAATCCTGACTGTGCTTTCATGTCCGACAATATGCGTGCTGCTGTTAAGAAGGTGGCAGAATATTTTCCAACGGCAATAATTAGTGGAAGAAGTCGTGATAAGGTAGTATATCAATTTGTAGGACTAACAGAACTTTATTACGCTGGTAGTCATGGAATGGACATCATTGGCCCTGTTAGACAATCTGTATCTGATAATCACCTAAATTGCATTAGGTCTACAGACAAGCAGGGTAAGGAAGTAAATTTATTCCAACCTGCTGCTGAATTTCTGCCCATGATTAATGAGGTACTTAATTCTCTTGAAGAGTGTACAAAAGACATTAAAGGAGCTAAAGTTGAGAACAATAAATTTTGTGTATCTGTGCACTACCGGAATGTAGATGAAAAGTATTGGAATTGGGTGGGGCAACGTGTTCATGATGTTCTGAAGGGCTATCCACGTTTGCGCTTAACTCATGGGCGGAAGGTTTTAGAGATCCGACCTGTGATTAACTGGGATAAGGGCAAAGCTGTCACGTTTCTACTTGAGTCACTTGGGCTAAACAATTGTGATGATGTGCTTCCTATATATATTGGAGATGATCGGACAGACGAAGATGCATTTAAGGTTTTGAGAGAGGGAAATAAAGGTTATGGGATCTTGGTGTCTTCAGCACCAAAAGAAAGCAACGCAATTTACTCTCTTCGTGATCCATCAGAGGTCATGGAATTTCTCAAGTCACTTGTGTTGTGGAAATCAAGCACCTTAAAAAGCCTTATATAG 1173 0.4066 MDLKSNHTPVLTDAAPVTKSRLGVHSSLLPYSHTGTTFTHGMLLTIPRKKTGILEDVRCSGWLDAMKSSSPPARKITKDVGLGFASSDSDTAGAYFSWLLKYPSALTSFDQITNYAKGKRIALFMDYDGTLSPIVDNPDCAFMSDNMRAAVKKVAEYFPTAIISGRSRDKVVYQFVGLTELYYAGSHGMDIIGPVRQSVSDNHLNCIRSTDKQGKEVNLFQPAAEFLPMINEVLNSLEECTKDIKGAKVENNKFCVSVHYRNVDEKYWNWVGQRVHDVLKGYPRLRLTHGRKVLEIRPVINWDKGKAVTFLLESLGLNNCDDVLPIYIGDDRTDEDAFKVLREGNKGYGILVSSAPKESNAIYSLRDPSEVMEFLKSLVLWKSSTLKSLI 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02119 390 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 385 IPR044651 GO:0004805|GO:0005992
Gma09g02119 390 Coils Coil 230 250 - -
Gma09g02119 390 Gene3D - 121 213 IPR023214 -
Gma09g02119 390 Gene3D - 220 388 IPR023214 -
Gma09g02119 390 TIGRFAM T6PP: trehalose-phosphatase 220 379 IPR003337 GO:0003824|GO:0005992
Gma09g02119 390 Pfam Trehalose-phosphatase 124 369 IPR003337 GO:0003824|GO:0005992
Gma09g02119 390 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 385 - -
Gma09g02119 390 CDD HAD_TPP 122 373 - -
Gma09g02119 390 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 123 342 IPR006379 -
Gma09g02119 390 SUPERFAMILY HAD-like 122 381 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02119 Gma-Chr9 46756410 46758744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02119 115 378 Trehalose Biosynthesis Gene Families AT1G70290 26.071 5.19e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02119 K01087 - gmx:100775207 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02119 09 46756410 46758744 Gma09g02119 09 46756410 46758744 ECH