Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02105 ATGTATGGCAAGCTTGACCAAAAGCAAAAACAGTCCCTCATTCAATGTTTCAATGATTCAAATAGCCAAGCAAAGGTGTTGCTTGCTTCTGTAAAAGCATCTTCTGATGGCATTAACTTAATTGGAGCTTCAAGGGTCATGCTTCTTGATGTTGTTAGGAATCCCTCAGTGGAAAGGCAAGCTATTTGTCGAGCATATAGACTTGGACAAAAGAGGGTTGTTTTCACATATCATCTTCTTGCACAGGGCACCCCCGAATGCACAAAGTATTGTAAACAAGCAGAAAAGAACCGGTTATCTGAACTTGTTTTCTCAAATAGAAATGCTGAAAGTGATAAGCTCAAGAGTAGTGGAGTAAGGTTTGAGGATAGAGTTCTTGATCTCATGGTTCAGCATAAAAAACTCAAGGATATGTTTGTAAAATGTGAGCAACGCCAACTGGAAACACTCTGGACAGCCAGCACCCGAAATGCAATTGTAAACCCAATTAATGGATTTTGA 501 0.3972 MYGKLDQKQKQSLIQCFNDSNSQAKVLLASVKASSDGINLIGASRVMLLDVVRNPSVERQAICRAYRLGQKRVVFTYHLLAQGTPECTKYCKQAEKNRLSELVFSNRNAESDKLKSSGVRFEDRVLDLMVQHKKLKDMFVKCEQRQLETLWTASTRNAIVNPINGF 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02105 166 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 115 IPR001650 -
Gma09g02105 166 CDD SF2_C_SNF 1 80 - -
Gma09g02105 166 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 1 149 IPR044567 GO:0080188
Gma09g02105 166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 141 IPR027417 -
Gma09g02105 166 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 4 1 149 - -
Gma09g02105 166 Gene3D - 1 161 IPR027417 -
Gma09g02105 166 Pfam Helicase conserved C-terminal domain 1 69 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02105 Gma-Chr9 46613743 46614482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02105 3 121 RAD5 or RAD16-like Gene Family AT5G43530 37.815 1.92e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02105 K10875 - gmx:100812737 254.603