Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02099 ATGGAAGCAGCTGTGGTGGACGTCGGCTCTAAGCTTCTCAAAGCGGACTTTGCAATTCCTGACCAGACTCCCGCCATGATAATTCCCACTCAGATGAAGCAATTGCTCGATGATGGATCAGTCACTGATAGTTCACTGGCTGACAATGTCACCGTTGATCCCGTCGTGCGAGGATTTATTAGAGATTGGGATGCCATTGAAGATTTGTTGCACCATGTTTTGTATACTGGCCTCGGATGGGAAATTGGCAATGAAGGACAAATACTATTTACTGATCCACTTTGTACCCCTAAGGCGAACAAAGAACAGTTGGTGCAACTAATGTTTGAAACATTCAACATCTCAGGGTTTTATGCCTCAGAACAAGCAGTGTTATCACTCTATGCTGTGGGACGTATCTCAGGCTGCACTGTTGATATTGGACATGGAAAAATAGAACTTGGCAAGTCCAATCCACAAGTAAATATCAGCATGTCTGATGTGGAGAAAATAAAAGAGCTGTACTCATGCTGTGCTGAAGATGAATTAGCTTATCAGAAGACCGGATATTCTTGTCCTGTGGAGAAGCACACCCTTCCTGATGGACAGGTAATAACAATTGGGAGAGAAAGATATACTGTTGGGGAAGCTTTATTCCAGCCATGTCTACTGGGTTTAGAGGCTCATGGCATTGTTGATCAGCTTGTCCGTGCTATTTCAACTGTGTCATCTGATAATCAACGGCAGCTGCTGGAAAATACTGTGGTTTGTGGTGGCACTTCTTCTATGGCAGGTTTTGAAGAGAGATTTCAGAAGGAATCTAGCTTAAGTTCATCTGCTGTTCAACCTACACTCGTTAAGCCTCCAGAATATATGCCAGAAAATTTAACCATGTATTCTGCATGGGTGGGAGGTGCCATACTTGCCAAAGTGGTTTTCCCTCAAAATCAGCATATAACTAAGGCAGACTATGATGAAACTGGACCTTCCATTGTTCACCGGAAATGCTTCTAA 993 0.434 MEAAVVDVGSKLLKADFAIPDQTPAMIIPTQMKQLLDDGSVTDSSLADNVTVDPVVRGFIRDWDAIEDLLHHVLYTGLGWEIGNEGQILFTDPLCTPKANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIELGKSNPQVNISMSDVEKIKELYSCCAEDELAYQKTGYSCPVEKHTLPDGQVITIGRERYTVGEALFQPCLLGLEAHGIVDQLVRAISTVSSDNQRQLLENTVVCGGTSSMAGFEERFQKESSLSSSAVQPTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHITKADYDETGPSIVHRKCF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02099 330 Pfam Actin 2 144 IPR004000 -
Gma09g02099 330 Pfam Actin 161 330 IPR004000 -
Gma09g02099 330 CDD NBD_sugar-kinase_HSP70_actin 57 145 - -
Gma09g02099 330 Gene3D Actin; Chain A, domain 4 150 214 - -
Gma09g02099 330 PANTHER BNACNNG31150D PROTEIN 1 146 - -
Gma09g02099 330 PANTHER BNACNNG31150D PROTEIN 146 329 - -
Gma09g02099 330 SUPERFAMILY Actin-like ATPase domain 131 330 IPR043129 -
Gma09g02099 330 Gene3D - 128 284 - -
Gma09g02099 330 PRINTS Actin signature 45 67 IPR004000 -
Gma09g02099 330 PRINTS Actin signature 100 113 IPR004000 -
Gma09g02099 330 PRINTS Actin signature 125 144 IPR004000 -
Gma09g02099 330 Gene3D - 2 127 - -
Gma09g02099 330 PANTHER ACTIN 1 146 IPR004000 -
Gma09g02099 330 PANTHER ACTIN 146 329 IPR004000 -
Gma09g02099 330 SUPERFAMILY Actin-like ATPase domain 2 138 IPR043129 -
Gma09g02099 330 SMART actin_3 1 330 IPR004000 -
Gma09g02099 330 Gene3D - 285 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02099 Gma-Chr9 46587584 46591314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02099 5 330 Cytoskeleton Gene Families AT5G09810 35.200 5.82e-60 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02099 K16615 - gmx:100814978 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02099 09 46587584 46591314 Gma09g02099 09 46587584 46591314 ECH