Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02093 GTTTGGTTTATGGGTGAATTCACCCATATCTCAGCTGAATTCGACAATGTTGTTTCAGTTGTTTTGGAAAATTATGGGGATGTCAAAGAAGATTCTCAAAATGAGAATGCTATGAGGCTTTATTCTTGGAGAATGGTAGTGAATGACAGAGGAGAAGTTAACGTGCCCGTGGACAATGCCACGAACCCTGGATTTTGGTCACGGGTTTGCATACAAAATATGGCAAAGTTAGCCAAGGAGGGAACAACAGTACGACGTGTTCTGGAATCCTTGTTCCGCTATTTTGATAATACCAATCTCTGGTCTCCAGAACATGGGCTTGCTCTTTCTGTTCTGCTTAACATGCAGTCTATAATTGAAAATTCTGGTCATAATACACATTTGTTACTATCCATTTTAGTCAAGCACCTTGATCACAAGAATGTCTTAAAGAATCCTAAAATGCAGCTTGACATTGTTGGTGTTATTACCCATCTTGCTCAACAAACAAGGGTTCAACAATCTGTGGCTATAATTGGTGCATTGAGTGATATGATGAGACATCTGCGAAAAAGCATACATTGCTCTCTTGATGATTCAAATTTAGGGTCTGAAATAATACAATGGAACCAGAAATACCGAATGGAAGTAGATGAATGCCTTGTACAATTAACAATTAAGATTGCAGATGCAGGTCCTGTTATTGATACCATGGCTGTGTTGTTGGAAAACATGTCTAATATTACTGTTATGGCGAGAACCTTGATTGCTGCAGTCTATAGAACTGCTCAAATAGTTGCTTCAATACCAAATTTGTCATATCAGAACAAGGCAAGATTAGCATTCCCTGAGGCATTATTTCATCAGTTACTCCTGGCAATGGTCCATGCAGACCATGAAACCAGGGTGGGTGCACACCGCATATTTTCTGTTGTTCTTGTGCCATCTTCAGTTTGTCCACAACCTTCCTCTTCGGGAACCCCTATGACACATGCAGCTGATATTCAAAGAATGCTCTCAAGAAATGTGTCTGTGTTTTCTTCTTCATCTGCACTCTTTGAGAAATTGGAGAGAAAGCAAAATTCCTTGCCAGAAGATAGTCATGCAGATGGAAATGTTAATGATAACTCCATTTTGAACAGATTGAAGTCAACTTATAGTCGTACTACTAGTACAAGAAAATCTGCTTTGACCAGTGCTGAATATACTGATAACAGGAACTCAAAGGTTCATAATTCTTCTATGATGAGTAGATTGAAGTCTAGTTACAGCCGTGCTACTAGTGTGAAGAAGCCACAAATACCTACAACTGTGGAAGAAAATACTACAAATACTTCAAATAAACAACAGGTATTACCCATTAGGCTCAGTAGTCATCAGATTACCCTTTTGCTATCATCAATCTGGGCCCAGTCTATCTATCCTCTAAACACATCTGAAAATTTTGAAGCAATTGCTCATACCTACAGCCTTGTCTTGCTAGTTGCTCGGAGTAAGAATTCCTCGCATGAAGCTCTAACTCAAAGTTTTCAGTTGGCTTTTTCCTTAAGGAACATTTCTCTCAATGAAAATGTAAAGCTGCAACCATCACGCCGCAGATCTCTCTTTACACTGGCAACATCCATGATTATCTTCGCATCCAAGGCCTACAACATCCTCTCTCTAATTTCTATTGCTAAAACGACATTGACAGATAGAACAGTTGATCCATTCCTGCAACTGGTTAATGATAGCAAGTTACAAGCGGTTACTGATACAGATAAGCAGCCAAGTAAAGTTTATGGATCAAAAGAGGATGATGAAGATGCTTTAAAGTCACTTTCAGCAATAAAGTTAACTGAGAGCCAGTCTAAAGAATCATTTGCTACCATGATAGTGCAGAGTCTGGGAAAATCGTCTAATGAATCATCCATCTTAAGAGAACGGCTGCTGAATGATTTCTCACCTGATGATGCCTGTCCTTTGGGAGCCCAGTTATCTGCCGAGACAACAGGAAATATGTACCAGTCTGGACTAAAAGAAGATAAACTTCCTGATATGGTTGATATTTCATTATTTACTATTGACGATGACATTCCACCTTGTGGTTTGGAGAGCCAAGCTAATTCTGATTCAATGCAACAGCCCTCACAAAATCTAAGCCTGCTGAGTGTTGATGACATTTTGGGTTCAgtttcggagacaacacatcaagtaggacggatttctatttcaacaccgtttgacatgccttacAAGGAAATGGCTCTCCATTGTGAGGCCCTCCTCGTGGGAAAGCAGCAGAAGATGTCCACTTTCATGGGTACCCTTCCAATGCAAGGATATTCATTTAGGATTCCTGCTCCTGAATACTACCAGCAAAAGGACGAGTCCTCAAATTCCAGCGTTCAACAGACTTTATCTTCGAGTGGAAATCCGTTTTTGGATTCAAACTTCGACTCGAATTCACACAACACATTGCCTGACACTGCTCCAAGGCTTTGTGCAACAGCATACCAGCATCAGGCTGCCTTCTTTCAACTGCCAGCATCACGCCCAGCTGTTTTTATGTGCATAGGTCATGCAAATGTAATCTTCCCAGATCGAGTGACAGACGACGCTAACAAAAGCCGATCAAGTCAACAATGGAGGAACTTCAAGGGTCTCAAACCCAATCATCGCTCGGTCAAGAAGATGAAAATGAATAGTAACCCCCCAAAAGTTGATTCTGAAGTTGAAGTCCTTCATGAGAAGGTCACCAAGCAAATCATTAAGGAAGGCCATGGCCAGAAACCTTCCAAATATTCAACTTGCTTCTTCCATTACAGGGCATGGGCTGAGAAATCAGAACACAAGTTTGAAGACACATGGCTGGAGCAACGGCCAATTGAGATGGTCTTAGGAAAAGAAAAGAAAGAAATGACTGGCTTGAGCGTTGGTGTGGCAAGCATGAAAGCTGGGGAGCGGGCATTGGTGCGTGTGGGCTGGGAATTAGGATATGGAGAGGAAGGAAGCTTCTCTTTTCCAAATGTTCCACCCAAGGCAGATTTAGTTTATGAAGTTGAGCTCATTGGCTTTGATGAAACCAAAGAAGGCAAAGCTCGCAGTGATATGACTGTGGAAGAAAGGATTGGTGCAGCAGACCGGAGAAAGATGGATGGAAATGCTTTGTATCAGGAAGAAAAACTAGAGGAGGCTATGCAACAGTATGAAATGGCCATAGCATATATGGGAGATGACTTCATGTTCCAGTTGTTTGGGAAGTATAGAGATATGGCTCTGGCTGTAAAGAATCCATGCCATCTTAACATGGCAGCCTGTTTGATTAAGCTGAACCGCTACGAAGAAGCTATAGGACAATGCAACACTGTACTGGGTGAGGATGAGAACAATGTGAAGGCGTTATTTAGGCGAGGTAAGGCTAGAGCAACACTTGGGCAAACAGATGCTGCCAGGGAAGATTTTCTAAAGGCAACTAAATATGCCCCTCAAGACAAAGCAATTGCTAAAGAATTGAGATTGCTTGCTGAACATGACAAGGCTGTTTACCAAAAGCAGAAAGAGATATATAAAGGAATATTTGGACCAAGGCCTCAACCAGTTCCTAAGCCAAGAAACTGGCTCATACTTATTTGGCAGTGGTTGCTTTCAGTATTCTATGGCCTTGTCACGCTCTTCAAGCGTGAAAGGCATAAATCTGACTAA 3663 0.407 VWFMGEFTHISAEFDNVVSVVLENYGDVKEDSQNENAMRLYSWRMVVNDRGEVNVPVDNATNPGFWSRVCIQNMAKLAKEGTTVRRVLESLFRYFDNTNLWSPEHGLALSVLLNMQSIIENSGHNTHLLLSILVKHLDHKNVLKNPKMQLDIVGVITHLAQQTRVQQSVAIIGALSDMMRHLRKSIHCSLDDSNLGSEIIQWNQKYRMEVDECLVQLTIKIADAGPVIDTMAVLLENMSNITVMARTLIAAVYRTAQIVASIPNLSYQNKARLAFPEALFHQLLLAMVHADHETRVGAHRIFSVVLVPSSVCPQPSSSGTPMTHAADIQRMLSRNVSVFSSSSALFEKLERKQNSLPEDSHADGNVNDNSILNRLKSTYSRTTSTRKSALTSAEYTDNRNSKVHNSSMMSRLKSSYSRATSVKKPQIPTTVEENTTNTSNKQQVLPIRLSSHQITLLLSSIWAQSIYPLNTSENFEAIAHTYSLVLLVARSKNSSHEALTQSFQLAFSLRNISLNENVKLQPSRRRSLFTLATSMIIFASKAYNILSLISIAKTTLTDRTVDPFLQLVNDSKLQAVTDTDKQPSKVYGSKEDDEDALKSLSAIKLTESQSKESFATMIVQSLGKSSNESSILRERLLNDFSPDDACPLGAQLSAETTGNMYQSGLKEDKLPDMVDISLFTIDDDIPPCGLESQANSDSMQQPSQNLSLLSVDDILGSVSETTHQVGRISISTPFDMPYKEMALHCEALLVGKQQKMSTFMGTLPMQGYSFRIPAPEYYQQKDESSNSSVQQTLSSSGNPFLDSNFDSNSHNTLPDTAPRLCATAYQHQAAFFQLPASRPAVFMCIGHANVIFPDRVTDDANKSRSSQQWRNFKGLKPNHRSVKKMKMNSNPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFFHYRAWAEKSEHKFEDTWLEQRPIEMVLGKEKKEMTGLSVGVASMKAGERALVRVGWELGYGEEGSFSFPNVPPKADLVYEVELIGFDETKEGKARSDMTVEERIGAADRRKMDGNALYQEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRYEEAIGQCNTVLGEDENNVKALFRRGKARATLGQTDAAREDFLKATKYAPQDKAIAKELRLLAEHDKAVYQKQKEIYKGIFGPRPQPVPKPRNWLILIWQWLLSVFYGLVTLFKRERHKSD 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02093 1220 Pfam Tetratricopeptide repeat 1119 1151 IPR019734 GO:0005515
Gma09g02093 1220 Gene3D - 889 1014 IPR046357 GO:0003755
Gma09g02093 1220 PANTHER CYCLIN-LIKE PROTEIN 1 395 - -
Gma09g02093 1220 PANTHER CYCLIN-LIKE PROTEIN 398 839 - -
Gma09g02093 1220 MobiDBLite consensus disorder prediction 779 809 - -
Gma09g02093 1220 ProSiteProfiles TPR repeat profile. 1118 1151 IPR019734 GO:0005515
Gma09g02093 1220 MobiDBLite consensus disorder prediction 377 440 - -
Gma09g02093 1220 PANTHER PUTATIVE, EXPRESSED-RELATED 1 395 - -
Gma09g02093 1220 PANTHER PUTATIVE, EXPRESSED-RELATED 398 839 - -
Gma09g02093 1220 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 921 1013 IPR001179 GO:0003755
Gma09g02093 1220 SUPERFAMILY FKBP-like 895 1019 - -
Gma09g02093 1220 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 917 1010 IPR001179 GO:0003755
Gma09g02093 1220 SUPERFAMILY TPR-like 1025 1175 IPR011990 GO:0005515
Gma09g02093 1220 SMART tpr_5 1118 1151 IPR019734 GO:0005515
Gma09g02093 1220 SMART tpr_5 1033 1066 IPR019734 GO:0005515
Gma09g02093 1220 SMART tpr_5 1084 1117 IPR019734 GO:0005515
Gma09g02093 1220 Gene3D Tetratricopeptide repeat domain 1015 1146 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02093 Gma-Chr9 46526646 46539781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02093 898 1186 Calmodulin-binding Proteins AT5G48570 32.095 2.23e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02093 K21842 - gmx:100808352 1583.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02093 09 46526646 46539781 Gma09g02093 09 46526646 46539781 ECH