Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02092 ATGAAGAGATTGAGGTCGAGCGAGGATCTCTACTCCTACGGCGGAGATAAGAGTAATAATAGTTGCAAGGATTCGAACAATCTTAACCGTTCGTTTTCGTCGGCGCAGCGGAGCTTCTACTACAAGCAGGAGAATGCGCGCAAGGGTTTGGTCTCGTCGTCTTCGTCGTCGTCATCACGGTACGAGAGGGATCGAACGGTGGAGGAGGATCGGGAGGGTTCGCGGCTGGTTCGGAAGCGATCGGAGCACGATTTCGAGGGTTTCGATCGGAGGAAGGGGTTCGATCGGTACAGGGAGAGTGACCGGAGTTTGATTCACCGGTCGGAGAGTTTCTGCGGCGGTGGAGGGTTGCGGAGGGATCAGTTTCCGAAGGGGTTTCGGTCGGAGAGGGAGCGATCGCGGAGGGAGGGGAGCGTGTCGTCGTGGCGGCGAGGGTTGAAGGATTTTGATGATAGAGAGAGGGTGGTGCGTTCTCCCAAGGGTTTGAGGGATGTGAAGTCTCCGTCGTGGTCGAAGGATTCTGTTTCTGAGAGCGAGCAATCGAAGAAGAGGTCTTCTTCTTCTCCGAGACCATTCAGAGATGGTAACTCCGTCAAGTCTAAGTCCAAGTCTCCCACTTGGTCCAAGGATTCGGAGAGCGAGCTGTCCAAGAGTGTTGAGGTGAAGAAGGTTGAGGAGGAGTTGTTGCAGCAGGTTCAGAGTGGGAGTGGGAGTGGGAGTGGTAGTGAGATGGAAGAAGGGGAGCTTGAGCCTGAACCCCAAGCGGAAACGGTTCCTCCTGTGACTGAAGGCCTGCCCTCTGTTGCTATGGAGACTGATGAGAAGCAAGTTCAGAAGAATGAATGCCACCCTAATGATGGTGACACTGATGCTGCTGTGGAGGAGGAAGGGAAACCTAACGAGGAGGATGGATGTTGTGAGGTAAAGGATGGAGAGAAGAAGAAAGAAGCTGATGAGATGGCAGATGTTCGGGATTATCAGACTGAGAAAATGCTTGTGACTGAGACTGAAGTTGAGTCTGTGGGTAATGGTGATGATGATAAAAAGGAGGAGGCTTTGGATGCTGGTGCTGAGTATGAGGAGGAAACAAAGAAGGGTGCGTGTGTGGAGGAGGAGAAGGAGAAGAAGGTGGCGTTGAATGAAGAGGAGGATAAGaaggacaagggcaaggacaaggacaaggacaagggcaaggGTGTAGATCTAGGAACCAGCACGGATGTTCTCAAACCTGAGTTAAATGATGTAGTATCGACAGGAAATGAGGTTCCAAAGGAAGTGGATAGAGAAATGATGATGGAGAATGTGATCAATATTGCAAAGGATAAAGGCAAAGGTGTCTCTGTTGCACTTGTACCTCCTACTGATGTTGTTCATGCTTTAGATGATGGCTTGTGGTTGGATAGAGAGTCGAGAGACCTCCTGACGTGTTCTGTTGATGTTATAGAAGGTCCAAGCACAAGGGGATTCGAGTTGTTTTCCAGATCTCCTGTTAGGAAAGTGGAGAAAGTAGACCACTCAGTTCTCAACAAGCACAAGGATGACATGGAGCAGCTTGATCTTACTCTTAGCTTGCCGAATGTTCTGTTACCTATtggtgctcatgagactggtgctcatgagacAACATCGCAAATCCCTGGATCCCCCAGTCAAGCACGGAGTGTGCAGTCTTTAAGTAATACATTTTGTACTAACTCAGATGGTTTTACTGCATCGATGTCCTTTTCAGGTTCCCAATCATTCTATCATAATCCAAGCTGTTCTCTGACAAAAAATTCAGTGGACTATGAACAATCTGTTGGCAGTCGCCCCTTATTTGGGGGAATAGATCAAGTTTCCCAGGGATGTTGGCAAGGTCAGTCTCAGAGCGATCCCAAACAGAAAGAAGTTCCTTTTGGTCAAAGAACCTCGGCGAATGGAAATGGCTCCCTTTTCCAGTCTCAGGCATCATGGGGTGTTTTAGACAGTCAAGCTGTGAAGGGTCAACATTCCAGGGTTCTAGAAGGAAGTTCAAAAATGGGCAGTGGACTTGACAGGCAATTGAGTTTTCATAAGCAGTTTTCAGGCCAGTCAAGACGCCATGATGATGTTAGATCTCCGTCACAGAGTGTTGGGTCTCATGATATTGGATCAAATTATAGCTTTGAGAAAAAGAGAGAGGTAAGAGACAGGGGTAGTGGTAGTCTGTATCGAACTACCGGCCAGAAGGAACAAGAGCAACTTCTGATGGGTGGAGTTGATTTTGTTGAGACAATCATTGCAAGAATTGTTTCTGAACCTGTTCAAGCAATGTCTAGAAAGTTTCATGAAATGACCGGACAGTCCATAGTATGTCTGAAGGAGGGTATTCGTGAAATCATGCTTAATGCAGATAAGCATGGGCAGATACTTGCTTTTCAAAAAGTTCTGCAGAACAGGTCTGATATAATCTTGGATGTCCTATTGAAGTGCCACCGAGTGCAACTGGAAATTTTGGTTGCTTTAAAAACTGGTTTGACTCATTTTCTTCACCTGGAGAGCAGCATTTCATCTTCTGAGTTGGCTCAAATTTTTCTGAACTTAAGGTGTAAGAATCTTTCATGTCGAAGTCAGTTGCCTGTGGACGAATGTGATTGCAAGGTTTGTGCAAAGAAGAATGGTTTTTGCAGGGAGTGTATGTGCCTTGTGTGTTCAAAGTTTGATAATGCCTCAAATACATGTAGTTGGGTTGGATGTGATGTTTGCCTTCACTGGTGCCATACTGACTGTGGATTACGGGAATCTTATATTAGAAATGGGCATGGGACAAAAGGGATGACCGAGATGCAGTTTCACTGTATTGCTTGTGATCATCCTTCTGAGATGTTTGGCTTTGTCAAGGAGGTGTTTCAAAATTTTGCAAAAGAATGGTCAGTTGAAACACTTTGCAAAGAGCTTGAATATGTAAAAAGAATTTTTTCTGCCAGCAAGGATATGAGAGGGAGACGGTTGCATGAGATTGCAGAGCAAATGCTGCCAAGGTTGGCAAATAAGTCTAATCTCCCTGAGGTTTTGAGGCACATCATGTCTTTTCTTTCGGATGGTGATTCTTCCAAATTACCCATGACAACAAACTTTTCTGGGAAGGAACAAATTAAAGAAAACAATGGAGTAGCTGGGCCCAGCCCGGAAGCAGCTTGGATGAAATCTATTTATTCAGAAAAGCCACCTCTGTTAGAAAGGCCTGCAAATATCCTTCCTACCTTCGACCAGAATGATAAAAGAACTCTTGTGCAAGAATTTCAGATGAGTAGTATCCAGAAGGACTTCTGTTTTGATGAATTGGAGAGTATAGTAAAAATTAAACAGGCAGAGGCTAAAATGTTTCAATCACGTGCTGATGATGCTAGAAGAGAAGCTGAAGGGTTGAAGCTCATTGCCCTTGCCAAGAATGAGAAAATTGAGGAAGAATATACCAATAGAATTGCCAAGTTGCGATTGACTGAGACTGATGAAATTCGTAAACAAAAATTTGAAGAAGCCCAAGCATTAGAGAGGGCACATCTGGAGTATTTGAACATGAAAATGAGAATGGAGACAGACATTAAAGATCTGTTATCCAAAATGGAAGCTACCAAAACGAGCCTTGCCATGTGA 3618 0.4442 MKRLRSSEDLYSYGGDKSNNSCKDSNNLNRSFSSAQRSFYYKQENARKGLVSSSSSSSSRYERDRTVEEDREGSRLVRKRSEHDFEGFDRRKGFDRYRESDRSLIHRSESFCGGGGLRRDQFPKGFRSERERSRREGSVSSWRRGLKDFDDRERVVRSPKGLRDVKSPSWSKDSVSESEQSKKRSSSSPRPFRDGNSVKSKSKSPTWSKDSESELSKSVEVKKVEEELLQQVQSGSGSGSGSEMEEGELEPEPQAETVPPVTEGLPSVAMETDEKQVQKNECHPNDGDTDAAVEEEGKPNEEDGCCEVKDGEKKKEADEMADVRDYQTEKMLVTETEVESVGNGDDDKKEEALDAGAEYEEETKKGACVEEEKEKKVALNEEEDKKDKGKDKDKDKGKGVDLGTSTDVLKPELNDVVSTGNEVPKEVDREMMMENVINIAKDKGKGVSVALVPPTDVVHALDDGLWLDRESRDLLTCSVDVIEGPSTRGFELFSRSPVRKVEKVDHSVLNKHKDDMEQLDLTLSLPNVLLPIGAHETGAHETTSQIPGSPSQARSVQSLSNTFCTNSDGFTASMSFSGSQSFYHNPSCSLTKNSVDYEQSVGSRPLFGGIDQVSQGCWQGQSQSDPKQKEVPFGQRTSANGNGSLFQSQASWGVLDSQAVKGQHSRVLEGSSKMGSGLDRQLSFHKQFSGQSRRHDDVRSPSQSVGSHDIGSNYSFEKKREVRDRGSGSLYRTTGQKEQEQLLMGGVDFVETIIARIVSEPVQAMSRKFHEMTGQSIVCLKEGIREIMLNADKHGQILAFQKVLQNRSDIILDVLLKCHRVQLEILVALKTGLTHFLHLESSISSSELAQIFLNLRCKNLSCRSQLPVDECDCKVCAKKNGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHGTKGMTEMQFHCIACDHPSEMFGFVKEVFQNFAKEWSVETLCKELEYVKRIFSASKDMRGRRLHEIAEQMLPRLANKSNLPEVLRHIMSFLSDGDSSKLPMTTNFSGKEQIKENNGVAGPSPEAAWMKSIYSEKPPLLERPANILPTFDQNDKRTLVQEFQMSSIQKDFCFDELESIVKIKQAEAKMFQSRADDARREAEGLKLIALAKNEKIEEEYTNRIAKLRLTETDEIRKQKFEEAQALERAHLEYLNMKMRMETDIKDLLSKMEATKTSLAM 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02092 1205 MobiDBLite consensus disorder prediction 341 401 - -
Gma09g02092 1205 MobiDBLite consensus disorder prediction 190 204 - -
Gma09g02092 1205 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 768 790 IPR004082 -
Gma09g02092 1205 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 807 822 IPR004082 -
Gma09g02092 1205 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 822 837 IPR004082 -
Gma09g02092 1205 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 848 869 IPR004082 -
Gma09g02092 1205 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 894 914 IPR004082 -
Gma09g02092 1205 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 964 983 IPR004082 -
Gma09g02092 1205 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1100 1120 IPR004082 -
Gma09g02092 1205 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1139 1161 IPR004082 -
Gma09g02092 1205 MobiDBLite consensus disorder prediction 686 730 - -
Gma09g02092 1205 MobiDBLite consensus disorder prediction 713 727 - -
Gma09g02092 1205 PANTHER PROTEIN OBERON 4 1 1204 - -
Gma09g02092 1205 CDD PHD_OBE1_like 887 943 - -
Gma09g02092 1205 Coils Coil 1106 1126 - -
Gma09g02092 1205 MobiDBLite consensus disorder prediction 274 332 - -
Gma09g02092 1205 Pfam PHD - plant homeodomain finger protein 857 977 IPR032881 -
Gma09g02092 1205 MobiDBLite consensus disorder prediction 43 82 - -
Gma09g02092 1205 MobiDBLite consensus disorder prediction 205 227 - -
Gma09g02092 1205 MobiDBLite consensus disorder prediction 108 406 - -
Gma09g02092 1205 MobiDBLite consensus disorder prediction 12 29 - -
Gma09g02092 1205 MobiDBLite consensus disorder prediction 61 82 - -
Gma09g02092 1205 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1204 IPR004082 -
Gma09g02092 1205 Pfam Coiled-coil region of Oberon 1077 1193 IPR032535 -
Gma09g02092 1205 MobiDBLite consensus disorder prediction 43 60 - -
Gma09g02092 1205 MobiDBLite consensus disorder prediction 617 642 - -
Gma09g02092 1205 MobiDBLite consensus disorder prediction 122 161 - -
Gma09g02092 1205 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02092 Gma-Chr9 46517019 46521918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02092 857 1002 PHD Gene Family AT5G57380 27.397 1.14e-13 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02092 - - gmx:100807816 2240.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02092 09 46517019 46521918 Gma09g02092 09 46517019 46521918 ECH