Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02078 ATGGGCAAAGAAAGTAGTACTTGTGTTCTTCTATCCCTTCTCATTCTTTCACTCTTTGTGGCTGAAATATATGGAAATAGACAAGTTCAAGCTCTTAACAAACTGCACAAGTCCACCAAGTTCAGAGGAAATTCACAAATTGATAGGAGTGAGTTTGAGGTAGAGGAGCTTGCTTATGATGGCATTGTTCACTCTCAAGAGGGTCTCAAAGAGAAAGATAGAATTGAGAGTCTTCCAGGACAACCCCCTGTGAGTTTTTCTCACTATGGAGGGTATGTCACTGTGGATAAAGAAGCAGGTCGTGCCTTCTATTATTACTTCGTTGAAGCTCAACGTTCTAAACAAACACTCCCACTTCTTCTTTGGCTCAATGGAGGTCCTGGATGTTCATCTCTTGGCTATGGAGCAATGCAAGAACTTGGACCTTTTCGAGTAAACAGTGATGGTAAAACACTCCACAGAAATATATTTTCTTGGAACAAAGTTGCAAATGTTTTATTCCTGGAGTCACCTGCTGGAGTAGGATTTTCCTATTCAAACAAATCAAAAGATTATGATACGAATGGAGATAAGAAAACAGCTGCAGACAATTATTTATTCTTGGTGAATTGGTTGGAGAGATATCCAGAATATAAGGAAAGAGATTTCTATATTGCTGGGGAAAGCTATGCTGGGCATTATGTGCCTCAATTTGCACATACCATTCTCTATCATAACAAAAAGGCAAATAAGAAAATCATCAATCTAAAAGGAATCTTGATTGGGAATGCAGTGATCAACGAGGAAACTGACTCGGACGGACTGTATGATTATCTTGCCAGCCATGCAATCATCTCAGACAAAGCAGCTTATCTCAACAAAGCTTGTGATTCATCATCATCAAAGATTCAGGAAAGTGTGTGCGATGCAGCCGGAGATGAACTTGGGGAGGATATTGAATACATTGATTTATACAATATTTATGCTCCACTATGCAAGAATGCAAATCTCACAGCCCTGCCCAAAAGGAACACAATTGTGACTGATCCATGTAGTGAGAATTATGTGTACGCATATCTTAATAGAAAAGATGTTCAAGAGGCTCTCCATGCCAATGTAACCAACCTCAAACATGACTGGGAACCCTGCAGCGATGTCATAACAAAGTGGGTTGATCAAGCTTCAACAGTTCTTCCACTTTTACATGAATTCCTCAACAATAGCCTCAGGGTTTGGATTTTCAGTGGTGACACAGATGGAAGGGTGCCTATTACATCAACCAAGTATTCAGTTAAGAAGATGAACCTTCCCATTAAATCTGTTTGGCACCCTTGGTTTTCCTATGGAGAGGTTGGTGGCTATGTAGAAGTATACAAGGGAGGCCTAACATTAGCTACGGTGAGGGAAGCAGGGCATCAAGTGCCAAGTTACCAACCAGCCAGAGCCCTAACTTTGATCAAATATTTCTTAGACGGCACTCCTCTTCCCGGTCCTCCCAAAAGAAAGGACTAG 1491 0.4091 MGKESSTCVLLSLLILSLFVAEIYGNRQVQALNKLHKSTKFRGNSQIDRSEFEVEELAYDGIVHSQEGLKEKDRIESLPGQPPVSFSHYGGYVTVDKEAGRAFYYYFVEAQRSKQTLPLLLWLNGGPGCSSLGYGAMQELGPFRVNSDGKTLHRNIFSWNKVANVLFLESPAGVGFSYSNKSKDYDTNGDKKTAADNYLFLVNWLERYPEYKERDFYIAGESYAGHYVPQFAHTILYHNKKANKKIINLKGILIGNAVINEETDSDGLYDYLASHAIISDKAAYLNKACDSSSSKIQESVCDAAGDELGEDIEYIDLYNIYAPLCKNANLTALPKRNTIVTDPCSENYVYAYLNRKDVQEALHANVTNLKHDWEPCSDVITKWVDQASTVLPLLHEFLNNSLRVWIFSGDTDGRVPITSTKYSVKKMNLPIKSVWHPWFSYGEVGGYVEVYKGGLTLATVREAGHQVPSYQPARALTLIKYFLDGTPLPGPPKRKD 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02078 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Gma09g02078 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Gma09g02078 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Gma09g02078 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Gma09g02078 496 Gene3D - 390 485 - -
Gma09g02078 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 488 IPR001563 GO:0004185|GO:0006508
Gma09g02078 496 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Gma09g02078 496 Gene3D alpha/beta hydrolase 69 327 IPR029058 -
Gma09g02078 496 PANTHER CARBOXYPEPTIDASE 9 488 - -
Gma09g02078 496 Pfam Serine carboxypeptidase 79 484 IPR001563 GO:0004185|GO:0006508
Gma09g02078 496 SUPERFAMILY alpha/beta-Hydrolases 67 490 IPR029058 -
Gma09g02078 496 Gene3D - 344 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02078 Gma-Chr9 46423860 46428716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02078 352 488 Calmodulin-binding Proteins AT2G22960 29.197 3.20e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02078 K16297 - gmx:100804815 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02078 09 46423860 46428716 Gma09g02078 09 46423860 46428716 ECH