Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02005 ATGGGCATTTGTCTTTGGAAATGGCAATGGCCGTGGCTTCTTTATGTTCTGCTGATACATGTTGTAATCTATAAAAGCggagcaatcacccccgatgGTGAGGTGCTTCTCAGCTTTAGGACATCAGTTGTTAGTTCTGATGGTATCCTATTACAGTGGAGGCCAGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAGTGTGATCCGAAAACCAAAAGAGTAACACATCTGAGTCTATCTCACCACAAGTTAAGTGGGTCTATATCACCTGACCTTGGGAAGCTAGAGAATCTGAGGGTTCTTGCTCTTCATAACAACAACTTCTATGGGACAATTCCATCAGAATTGGGAAATTGCACTGAATTGGAGGGAATATTTTTACAGGGTAATTACCTTAGTGGAGTGATTCCAATTGAAATAGGAAACCTTTCACAGCTTCAAAATTTGGATATATCAAGCAATTCCCTCAGTGGGAATATTCCTGCATCACTTGGGAAGTTGTATAATCTCAAAAATTTCAATGTGTCAACCAATTTTCTGGTTGGACCTATACCTGCTGATGGTGTCCTTGCCAACTTTACTGGAAGCTCATTTGTTGGGAATCGTGGTTTGTGTGGAGTGAAAATAAATTCAACATGTAGAGATGATGGTTCGCCGGATACCAATGGTCAATCTACTTCCTCAGACCAAAATCAAATAGGAAAGAAGAAATATTCTGGCCGGCTGCTCATCAGTGCATCAGCAACTGTGGGAGCTCTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTTCTTTATAAGAAGTTTGGCAAAAATGACAGAATAAGTCTGGCGATGGATGTTGGTTCAGGTGCATCAATTGTGATGTTTCACGGAGACCTACCATATTCTTCAAAAGACATCATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGGATAGGGGGATTTGGAACTGTTTACAAGCTAGCAATGGATGATGGGAATGTATTTGCTTTGAAAAGGATTGTAAAGCTGAATGAGGGGTTTGATCGTTTTTTTGAGAGGGAGCTTGAAATTCTTGGTAGCATCAAACACCGTTATCTAGTGAATTTACGAGGATATTGCAATTCACCTACGTCAAAGTTGTTAATATATGATTACCTACCAGGTGGTAGTCTTGACGAAGCACTTCATGAAAGAGCTGATCAACTAGACTGGGATTCGCGCTTGAATATAATCATGGGAGCTGCAAAagggcttgcctacttgcaccatgattgttcccccaggatcatacaccgagacataaaatctagcaacattttacttgatggaaacttggaggctcgggtctctgattttggacttgccaaacttctggaggatgaagaatctcacatcaccactattgttgctggaacatttggttatctagctccagAGTATATGCAAAGTGGCAGAGCAACtgagaagtctgatgtgtatagctttggtgtgttgacactcgaagtgctgagtggaaAGCGACCAACAGACGCAGCATTCATTGAAAAGGGCCTCAATATTGTTGGTTGGTTGAATTTTCTAATTACAGAAAATAGGCCGAGGGAAATTGTCGACCCTCTATGTGAAGGGGTGCAAATGGAGAGCCTTGATGCCTTGCTCTCTGTGGCTATTCAGTGTGTTTCCTCAAGTCCAGAGGATCGACCCACTATGCACCGAGTGGTGCAATTGCTTGAATCAGAGGTCGTAACTCCATGCCCTAGTGACTTCTACGACTCCAACTCCGATTAG 1788 0.3557 MGICLWKWQWPWLLYVLLIHVVIYKSGAITPDGEVLLSFRTSVVSSDGILLQWRPEDPDPCKWKGVKCDPKTKRVTHLSLSHHKLSGSISPDLGKLENLRVLALHNNNFYGTIPSELGNCTELEGIFLQGNYLSGVIPIEIGNLSQLQNLDISSNSLSGNIPASLGKLYNLKNFNVSTNFLVGPIPADGVLANFTGSSFVGNRGLCGVKINSTCRDDGSPDTNGQSTSSDQNQIGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRISLAMDVGSGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGIGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHERADQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKSDVYSFGVLTLEVLSGKRPTDAAFIEKGLNIVGWLNFLITENRPREIVDPLCEGVQMESLDALLSVAIQCVSSSPEDRPTMHRVVQLLESEVVTPCPSDFYDSNSD 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02005 595 Gene3D Phosphorylase Kinase; domain 1 282 385 - -
Gma09g02005 595 SMART serkin_6 310 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02005 595 ProSitePatterns Protein kinases ATP-binding region signature. 316 342 IPR017441 GO:0005524
Gma09g02005 595 PANTHER RECEPTOR-LIKE PROTEIN 55 3 595 - -
Gma09g02005 595 SUPERFAMILY Protein kinase-like (PK-like) 293 577 IPR011009 -
Gma09g02005 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Gma09g02005 595 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Gma09g02005 595 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 3 595 IPR031071 GO:0004672|GO:0005524|GO:0030244
Gma09g02005 595 ProSiteProfiles Protein kinase domain profile. 310 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02005 595 Pfam Protein kinase domain 312 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02005 595 Gene3D Transferase(Phosphotransferase) domain 1 386 583 - -
Gma09g02005 595 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Gma09g02005 595 SUPERFAMILY L domain-like 30 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02005 Gma-Chr9 45660803 45669752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02005 1 586 Receptor kinase-like Gene Family AT2G35620 75.085 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Gma09g02005 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02005 - - gmx:100819230 1173.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01550 01 51006197 51017205 Gma09g02005 09 45660803 45669752 GST