Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02003 atgggtgccactttcctctgccttcatctcagactgGCACCGACCCGAGTAGAGTCCAGCTCCGAACCCGTTCACGTTTTTCTACCTCGAATGGACATTCAATTTGTTGTGGACAATGTGAACACCATTATTGCTCCTACTTTGGTTGGCGAGGAATCAATTGTGATTAGCAAAGGGGAGGCCTCTGATTTTGTGGCAAAAGCTGTGGATTTAGCAGCCAGAGAATTAATAGCAATTGCATCACCAGGACAAGCAGTTAAAGGAACTTGGATGGATGGTGAAAGTCTCAATGCTGTACTTCATCTATTTATAATTGGTTCTGATGTTTCTTCACCTGGAAAATTAACTTATTTTTTGTTCGAACAACGTTTGGGATGTTACCTCCTTCATGTTAGAGGGGATATAGCAAGGGTATTAATCTTGAACTACTTGCTTTGCCTGATGACGACGTTCCTAAATTACCCCTTCATATCGGTTGTGGATTGGGACTTAGAGGTGAGACAATCTCGGAGAATGGACACCATTGGATTGGGCTTGATATTTCAGCATCAATGCTTAAGCACTTGCCAGAAGAATCCAGATCCAGGAAGATTGGTAGATTTACTGGAGAGAGCTAGAGTTTCATTGCAGATGATAAGATATTTGGCCTTAGATGAGGCAGATAGAATGCTGGATATAGGTTTCGAGCCACAAATAAGGAAGATTGTAGAACAAGTGGACATGCCCCCAGCAGGTGCCAGACAGACTATGTTGTTCAGTGCTACATTTCCAAGAGATACAGAGACTTGCCTCTGA 795 0.4075 MGATFLCLHLRLAPTRVESSSEPVHVFLPRMDIQFVVDNVNTIIAPTLVGEESIVISKGEASDFVAKAVDLAARELIAIASPGQAVKGTWMDGESLNAVLHLFIIGSDVSSPGKLTYFLFEQRLGCYLLHVRGDIARVLILNYLLCLMTTFLNYPFISVVDWDLEVRQSRRMDTIGLGLIFQHQCLSTCQKNPDPGRLVDLLERARVSLQMIRYLALDEADRMLDIGFEPQIRKIVEQVDMPPAGARQTMLFSATFPRDTETCL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02003 264 Gene3D - 193 264 IPR027417 -
Gma09g02003 264 PANTHER - 195 259 - -
Gma09g02003 264 Pfam DEAD/DEAH box helicase 195 261 IPR011545 GO:0003676|GO:0005524
Gma09g02003 264 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 195 264 IPR014001 -
Gma09g02003 264 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 195 259 - -
Gma09g02003 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 259 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02003 Gma-Chr9 45644095 45649571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02003 195 257 Eukaryotic Initiation Factors Gene Family AT3G13920 42.857 3.58e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02003 K11594 - gmx:100784557 125.176