Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01998 ATGGCTAGATCCAAACGACGGAGGTTTACCAGTGGTAGCAATGTCAGACCCGGGACTATGACTTTCGAGCCTATTTTGGAAGAAGGAGTGTTCCGTTTTGATTGTTCTGTAAATGTTAGAGATGCAGTACCCCCCAGTATTTCTTTTTTGAATACCAATGATAGAGACATATCTATCTATAGTGAGAAGGTTCCGCTCTATACCCCGACGTTTGCGTGTCGTTCAGAGAAGCAGGTTGTCAAACTTGAGCTGCCTGTAGGTTCTTCCCTTTATGGAACGGGAGAAGCTAGTGGTGAGCTCGAGAGGACAGGCAAAAGAGTTATCACATGGAACACGGATGCATGGGGTTATGGACCGGGAACTACCTCCTTGTACCAATCACATCCATGGGTGTTAGCTGTTCTTCCAAACGGTGAGGCGATAGGAATTCTTGCCGACACTACAAGGCGCTGTGAGATTGATCTGAGGAAAGAATCAACAATACAGTTTGTTGCTCCATCCGCATATCCTGTCATTACATTTGGTCCTTTTGCTTCACCCACAGCAGTGTTGATATCTCTATCAAAAGCAATTGGAACTGTATTTATGCCCCCAAAATGGTCATTAGGCTATCATCAATGCCATTCGAGATATTTATCTGACGAGAGAGTTCTGGAGGTTGCAAAAACATTCCGGAAAAAGAGCATACCTTGTGATGTGATATGGATGGATAACAGTTACATGGATGGTTTTCGTTGTTTCACCTTTGACAAGGAGCGTTTTCGAGATCCCATGTCTTTAGTGAAAGATCTCCATTATAGTGGTTTTAAAGCTATTTGGATGCTTGATCCTGGAATAAAGCAGGAAGAGGGTTATTTTGTATATGATAATGGTTCTAAAAAAGATGTTTGGGTCCAAAAGGAAGATGGAAATCCTTATGTTGGAGAGGTGTGGCCTGTTCGATGTGTCTTCCCTGACTATACACAGTCAAAAGTTCGTGCATGGTGGGCAAATTTAGTTAAAGACTTCATATCCAAAGGTGCTGATGGTATATGGAATGATATGAATGAACCATCTATCTTTAAGGATGTAACAAAAACAATGCCTGATAGCAATGTTCATAGTGGAGATAGTGAACTTGGAGGCTGTCAGAATCATTCTTTCTATCACAATGTGTATGGTCTTCTGATGGCAAGATCAACCTATGAAGGCATGAAACTGGCTAATGAAAAGAAGCGTCCTTTTGTTCTTTCAAGAGCTGGATTTGTTGGCAGCCAAAGGTATGCTGCAACATGGACTGGAGATAATCTTTCAACCTGGGAGCATCTTCATATGAGTATCTCCATGGTACTTCAGCTGGGACTTAGTGGTCAGCCACTTTCAGGTGCGGATATTGGTGGATTTGCTGGAAATGCATCACCTAGACTTTTTGGAAGGTGGATGGGTGTTGGTTCCTTGTTTCCCTTTTGCAGAGGGCATTCTGAAGCTTGCACCACTGACCATGTACCTTGGTCTTTTGGGGAAGAGTGTGAAGAAGTTTGCCGATTGGCATTGAAGAGGCGCTACCGCCTGATCCCACTTATCTACACTCTTTTTTATTTTGCTCATACATGGGGCACACCAGTGGCAACCCCTACTTTCTTTGCTGATCCAAAAGATCCTAGCCTGAGGAAGCTTGAAAATTCATTTTTGCTTGGTCCAATCTTAGTGTTTGCAAGCACCTTACGTAGACAGGGTTTGGATAAGTTGGAGATTACTTTACCTAAGGGGATATGGCTGAATTTTGATTTCAACGATGCACATCCGGATTTGCCAGCTTTATACTTAAAAGGTGGCTCGATAATTCCTGTGGGCCTCCCTCATGAACATGTTGAAGAGGCTAATCCTTCAGATGACTTGACTCTTTTTGTGGCTTTAGATGATCATGGGAAAGCTGAAGGTGTTCTATTTGAAGATGATGGTGATGGATACGAATTCACAAAAGGCAATTATTTATTAACACATTATGTGGCTGAACTTAAATCATCAGTTCTTACTGTGAGTGTCCAGAAAACTGAAGGGTCATGGGAAAGACCTAAACGCCGCCTGCATATTCAATTATTGCTGGGTGGGGGTGCAATGCTTGATACATGGGGAACTGATGGAGAAGTTCTGCAACTAATTTTGCCTTCGGAAGATGAGGTGTCGGAGCTAGTATCTACTAGTGAGAAGAATTACAAGGACCGCTTGGAAAATGCAACTCCAATTCCTGATgtagaagtagaagtagaagtagaagAGGTTTCTGGACCCATGGAAACACAGATTTTAAGAATTCCCATTGAACAGCAAAGTGACATAGAAGACCATGTTAGTCAGACGCCTGAGGAGGCAAGTACGCCAACTGATGGAGCGATAAATATTGCTGATTGTAGTGACGCATTCAAGACTACAGAGCTTttcccttcccgagatgctgtgctgaattgggctcgagaagttgcaaaagagaatggatttgtccttactattttgaggtcagaaacacatacaggaagtaataaaaagaatattagagggaagacatatgtaattctgggttgtgaaaggagtggaaaatatagaccatacaagaatacattatctaaggtgactagttccaaaaaatgtgagtgccccttcaagctaaagggaaaagctttgaacaaggatgaagggtggattgttaaggtaatgtgtggttatcacaaccacgacttaggggaaacattagtggtgggtcattcatatgctggtcgactaactgctgaagagaagtcattggtcattgatatgacaaagaaaatggtggagccgagaaacatactactaacattgaaggatcacaataatgacactactatcaggcatatttacaatgctcgacaagcatatcgatcttctcagaaaggtcctaggacagaaatgcaacacctactaaagttattggaacatgatcaatatgtgtgttggagtagaaaggtggacgattctgatgctatcagagatatattttgggcacatccagatgccatcaaacttttaggttctttccacactgtcttgttccttgacaatacttataaagtcaacaggtatcaattgccactgcttgagattgttggtgttacatccacagagttaacattctctgttgcatttgcttatatggagtcggatgaagttgataacttcacttgggcactacagaagctaagagaactgattgtcaaagacaacgagatgcctccagtaattataactgttagagacattgctctgatggatgcagtgcaggtggtctttcctagctcttctaatttgttatgtcgttttcatataagcaagaatgtgaaggctaaatgcaagttgatagttcatccgaaggagaaatatgacttggtgatggatgcatgggatagtgtgatgaattctcccaacgagggtgagtatatgcaacggttgacattacttgaaaaggtttgctcagattttcctacttttggcgattatgtgaaaaatacatggctgattcctcacaaggaaaaatttgttatggcatgggtagatcgagtgatgcatttgggtaacactacaatcgacaggtttgaaacagcacattggaggctggagaacttgcttcaagatagtgggggggatatgtgtagttgttgggatgctgtgaacaacatgattaaattgcaacacacacagattaaggtgtcgtttgagaaaagtataaacattgtggaatacaatgatccattctatagcaagctgcggggatttgtatcaaggaatgcattgagttatatagctgaccattatgaccgagttaagaccgttggtattgatattgatggttctttatgtggatgcacaattagaactacacatggtctaccttgtgcgtgtgaacttgctaagtatagtaggacgtggcacccaattcccttgcaagcaattcatgttcattggaggacattaaacttcagtgaccaagaaatgaacaatgaggggctcgagttagcgttgcaacgtgaagtggatgctttgcacaatcaatttcaggaacttgattatgctggaaaaattactttgaaggccaaattgcgtgaactagcatttcctgatgcaattttaatgtgtccgtctcctgaaaattactttgatgctccaaaggctctgggcttccgcgagagacaaatcaattga 4212 0.2431 MARSKRRRFTSGSNVRPGTMTFEPILEEGVFRFDCSVNVRDAVPPSISFLNTNDRDISIYSEKVPLYTPTFACRSEKQVVKLELPVGSSLYGTGEASGELERTGKRVITWNTDAWGYGPGTTSLYQSHPWVLAVLPNGEAIGILADTTRRCEIDLRKESTIQFVAPSAYPVITFGPFASPTAVLISLSKAIGTVFMPPKWSLGYHQCHSRYLSDERVLEVAKTFRKKSIPCDVIWMDNSYMDGFRCFTFDKERFRDPMSLVKDLHYSGFKAIWMLDPGIKQEEGYFVYDNGSKKDVWVQKEDGNPYVGEVWPVRCVFPDYTQSKVRAWWANLVKDFISKGADGIWNDMNEPSIFKDVTKTMPDSNVHSGDSELGGCQNHSFYHNVYGLLMARSTYEGMKLANEKKRPFVLSRAGFVGSQRYAATWTGDNLSTWEHLHMSISMVLQLGLSGQPLSGADIGGFAGNASPRLFGRWMGVGSLFPFCRGHSEACTTDHVPWSFGEECEEVCRLALKRRYRLIPLIYTLFYFAHTWGTPVATPTFFADPKDPSLRKLENSFLLGPILVFASTLRRQGLDKLEITLPKGIWLNFDFNDAHPDLPALYLKGGSIIPVGLPHEHVEEANPSDDLTLFVALDDHGKAEGVLFEDDGDGYEFTKGNYLLTHYVAELKSSVLTVSVQKTEGSWERPKRRLHIQLLLGGGAMLDTWGTDGEVLQLILPSEDEVSELVSTSEKNYKDRLENATPIPDVEVEVEVEEVSGPMETQILRIPIEQQSDIEDHVSQTPEEASTPTDGAINIADCSDAFKTTELFPSRDAVLNWAREVAKENGFVLTILRSETHTGSNKKNIRGKTYVILGCERSGKYRPYKNTLSKVTSSKKCECPFKLKGKALNKDEGWIVKVMCGYHNHDLGETLVVGHSYAGRLTAEEKSLVIDMTKKMVEPRNILLTLKDHNNDTTIRHIYNARQAYRSSQKGPRTEMQHLLKLLEHDQYVCWSRKVDDSDAIRDIFWAHPDAIKLLGSFHTVLFLDNTYKVNRYQLPLLEIVGVTSTELTFSVAFAYMESDEVDNFTWALQKLRELIVKDNEMPPVIITVRDIALMDAVQVVFPSSSNLLCRFHISKNVKAKCKLIVHPKEKYDLVMDAWDSVMNSPNEGEYMQRLTLLEKVCSDFPTFGDYVKNTWLIPHKEKFVMAWVDRVMHLGNTTIDRFETAHWRLENLLQDSGGDMCSCWDAVNNMIKLQHTQIKVSFEKSINIVEYNDPFYSKLRGFVSRNALSYIADHYDRVKTVGIDIDGSLCGCTIRTTHGLPCACELAKYSRTWHPIPLQAIHVHWRTLNFSDQEMNNEGLELALQREVDALHNQFQELDYAGKITLKAKLRELAFPDAILMCPSPENYFDAPKALGFRERQIN 1403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01998 1403 CDD GH31_glucosidase_II_MalA 192 532 - -
Gma09g01998 1403 Pfam Glycosyl hydrolases family 31 179 608 IPR000322 GO:0004553|GO:0005975
Gma09g01998 1403 Gene3D Glycosidases 195 516 - -
Gma09g01998 1403 PANTHER ALPHA-GLUCOSIDASE 15 772 - -
Gma09g01998 1403 ProSitePatterns Glycosyl hydrolases family 31 active site. 343 350 IPR030458 -
Gma09g01998 1403 Gene3D - 517 601 IPR013780 -
Gma09g01998 1403 PANTHER BNAA01G23630D PROTEIN 15 772 - -
Gma09g01998 1403 CDD GH31_N 80 192 - -
Gma09g01998 1403 SUPERFAMILY Galactose mutarotase-like 71 164 IPR011013 GO:0003824|GO:0005975|GO:0030246
Gma09g01998 1403 Gene3D glycosyl hydrolase (family 31) 34 175 - -
Gma09g01998 1403 Pfam MULE transposase domain 1020 1116 IPR018289 -
Gma09g01998 1403 Gene3D - 605 738 IPR013780 -
Gma09g01998 1403 SUPERFAMILY Glycosyl hydrolase domain 534 593 - -
Gma09g01998 1403 Pfam Domain of unknown function (DUF5110) 626 694 IPR033403 -
Gma09g01998 1403 Pfam Galactose mutarotase-like 89 154 IPR025887 -
Gma09g01998 1403 SUPERFAMILY (Trans)glycosidases 189 532 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01998 Gma-Chr9 45584378 45598406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01998 20 771 Glycoside Hydrolase AT3G23640 69.814 0.0 1137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma09g01998 Glyco_hydro_31 3e-126 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01998 - - gmx:100782358 2871.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01998 09 45584378 45598406 Gma09g01998 09 45584378 45598406 ECH