Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01997 ATGTCCCTTCTCAGCCGATTCTTCTACAAGCGCCCCCCTGACGGCTTACTCGAATTCTCCGACAGAGTATACGTCTTCGATTCCTGCTTCTCGACGGAGGCACTCCCGGACGGAATGTACAGCCTCTACCTCCGCCAAATCCTCTCTGACCTCCACGAGGACTTCCCGGAATCCTCCTTCGTGGCCCTCAACTTTCGCGACGGCGACCACCGCAGCCGTTTCTCCCGCGTCCTCTGCGACCTGGACGCCACATTCGTCGTCGACTACCCAAAGCAGTACGAGAGCTGCCCCCTCCTCCCCCTCTCCCTCCTCCACCACTTCCTCCGCCTTTGCGACTCCTGCCTCGCCGACCCCGGCGCCCTGATCCTCCTCCACTGCGAGCGCGGCGGCTGGCCCCTCCTCGCCTTCCTCCTCGCCGCCTTCCTCGTCTTCCGCAAGGCCGCGCAGACCGGGGAGCGCCGGATTCTCGAGATGGTTCATAAGGAGGCGCCGAAAGGGTTGCTGCAGCTGTTGTCGGCGCTGAACCCGCTGCCGTCGCAGCTGCGGTATGTGAAGTATGTGGCCAGGAGGAACATTGGGGCGGAGTGGCCCCCACCGGAGAGGGCACTGTCTTTGGATTGTGTTATTCTCAGAGGGGTTCCTGGGTTTGATGGGGGCAATGGGTGCAGGCCACTGTTTAGGATTTTTGGCCGGAATTTGCTTAGTAAAGGGGGGCTTTCAACACAGATGATTTATAATATGCATAAGAAGAAGAAGACTTTGAGGCACTATAGACAGGCAGACTGTGATGTGATTAAGATTGATATTCAATGCCTAGTGAAAGGGGATGTGGTGTTGGAGTGTGTCCATTTGGATTTGGATCCGGAGAGGGAAGTGATGATGTTTCGGGTGATGTTCAACACGGCGTTTATTCGGTCCAACATTTTGATGCTGAATTCTGAGAACTTGGACATTCTTTGGGATTCGAAGGAGCGGTATCCGAAGGGCTTCCGGGCTGAGGTTTTGTTTGGGGAGGTTGAAAGCATAAGTCCTCCAAGGGCTCAAACAAGTATTTTAGATGGTGAGGTGAAAGGTGGATTGCCTATTGAGGCATTTTCGAGGGTTCAAGAACTTTTTAGTGGTGTAGAATGGGTTGAAAGTGGGGATGCTGCTGCTGCCTGGCTGCTCAAACAGCTTACAGTCTTAAATGATGCCAAAGAGCTTTCAAGGTTTCAAGGTAGAGGAAGTTGGTATTCATCACCTGCTGACTCTGACTCTGAAAATAATGAATCAAGCACAGCTGATAGTTCAGATGAGGCCTTTGATGTTATTCCCAAGTCTTATGCTGATCCTTCAAAATTATTGATATCTGACAACCCTGATTTGGTCCATTTAGCTTTTGAGAACAATGGTGGAGATTATGTAAATCTCACTTCAAGAACACCTGATCAGTCATTGACTGATAATGTTTCATTACCTCATCATGCTCCCAGAAAGGAATATTCTCCTTGTTCCTCTCCACCATCACCTTCACCAGTTCCCGCTACTCAACCTTTTCCAACACCGGCACCACCACTTCCCACATCAATGCCTATACAGCCAGATTTAGCTCCTCCCTTGCCTCCGCATCAGATAGATCAGAATGTGAACAGTGCTTCTACATTGCCTTCACCTCCTCCTCCTATAGTTTCCAATGCTCCTAGTCAACCTCCACCGCCTCCTCCTCCTCctccacttcctccacgatctgtacaaactggttcagctccacctcctccaggacctgtacggacaggctcggtaccaccgcctccacctcctccaggatctgtacaaactggttcagctccaccacctccacctcctccaggtccagtacgaacaggctcggtaccaccgcctccacctcctccaggatctgtaaaaactggttcagctccaccacctccacctcctccaAgttcagccccacctcctcctcctcctcctcctcctctaggtcctgtacgaacaggtccagccccacctcctcctcctcctcctcctccaggtcctgtacgaacaggttcagctccaccacctcctccccctccAAGTGTACGAACAGGTTCAGCTCCACCACCACCACCACCGGCACCAAAACCTCCAGGTGTTCTTCCTCCTCCACCTGGCCGTGGTGCATCACCGATGCCACCTCCACCACCTGCAGCTAGGGCCCCTGGTGTGGCACCACCACCAGGCAAAGCTTCAACAGCAAATGTTGGAAGAGGTCGTGGTACTGGTGGTACTGTTAATGCTCCTAAGAAAACTTTGCTAAAACCCCTACACTGGGTGAAAGTTGCTCGAGCAGCCAAGGGAAGTCTATGGGCTGATTCACAGAAACAGGATAGTGGAACAAGGGCTCCTGAGATAGATATTTCAGAACTTGAGAGCCTGTTTTCAGCAGCATCTACTTCTGATGGGAGCAGCACTAAAGGTGGAGGTCGGCGTGGTCCTAATATTAACAAACCTGAGAAAGTACAATTGGTTGATTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATATGCTTAAAGCAGTCCTGGCATTGGATTCTGCAATTCTGGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCTACAAAGGAAGAGATGGAGATGTTAAAGAATTATACAGGAAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTTATGGAGCTGATGAAGGTTCCACGTGTGGAATCCAAATTAAGGGTTTTTGCTTTTAAAATCACCTTTTCTTCTCAGGTGAATGATTTGAAGTTAAATTTGAACACAATCAACAATGCAGCCAGAGAGGTGAAAGAATCTGGAAAATTGCGTCAAATAATGCAGACCATTCTTACTCTGGGCAATGCCTTGAATCAAGGAACAACACGAGGATCAGCTGTTGGATTCAAATTGGATAGCCTTCTTAAATTATCTGATACCCGTGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCTGAGAAAATGCCAGAATTGCTAGATTTTGATAAGGATCTTGTCCATTTGGAAGCAGCTTCTAGGATTCAACTAAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTAGAGAAAGTTGAGCAAGAACTCGCTGCTTCTGAAAATGATGGTGCTATATCTACAGGATTTCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGATGTGAGGTCTCTTATATCATTGTATTCTGAAGTGGGAAGAAGTGCAGACTCTTTGTCCCAGTACTTTGGAGAGGATCCAGCTAGATGCCCTTTTGAACAAGTGACACAAATCCTTGTTGTCTTTGTCAAGATGTTCAACAAGTCAAGGGAGGAAAATGAAAGGCAGGCGGATGCTGAAAAAAAGAAATTAGAGAAAGAAGCCTTGAAGGAAAGGACAGCAAATAACTTGCATTCCAAAAAAGATGGTGTTCGATAG 3507 0.4229 MSLLSRFFYKRPPDGLLEFSDRVYVFDSCFSTEALPDGMYSLYLRQILSDLHEDFPESSFVALNFRDGDHRSRFSRVLCDLDATFVVDYPKQYESCPLLPLSLLHHFLRLCDSCLADPGALILLHCERGGWPLLAFLLAAFLVFRKAAQTGERRILEMVHKEAPKGLLQLLSALNPLPSQLRYVKYVARRNIGAEWPPPERALSLDCVILRGVPGFDGGNGCRPLFRIFGRNLLSKGGLSTQMIYNMHKKKKTLRHYRQADCDVIKIDIQCLVKGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNSENLDILWDSKERYPKGFRAEVLFGEVESISPPRAQTSILDGEVKGGLPIEAFSRVQELFSGVEWVESGDAAAAWLLKQLTVLNDAKELSRFQGRGSWYSSPADSDSENNESSTADSSDEAFDVIPKSYADPSKLLISDNPDLVHLAFENNGGDYVNLTSRTPDQSLTDNVSLPHHAPRKEYSPCSSPPSPSPVPATQPFPTPAPPLPTSMPIQPDLAPPLPPHQIDQNVNSASTLPSPPPPIVSNAPSQPPPPPPPPPLPPRSVQTGSAPPPPGPVRTGSVPPPPPPPGSVQTGSAPPPPPPPGPVRTGSVPPPPPPPGSVKTGSAPPPPPPPSSAPPPPPPPPPLGPVRTGPAPPPPPPPPPGPVRTGSAPPPPPPPSVRTGSAPPPPPPAPKPPGVLPPPPGRGASPMPPPPPAARAPGVAPPPGKASTANVGRGRGTGGTVNAPKKTLLKPLHWVKVARAAKGSLWADSQKQDSGTRAPEIDISELESLFSAASTSDGSSTKGGGRRGPNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLKAVLALDSAILDIDQVENLIKFCPTKEEMEMLKNYTGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNDLKLNLNTINNAAREVKESGKLRQIMQTILTLGNALNQGTTRGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASRIQLKALAEEMQAVSKGLEKVEQELAASENDGAISTGFRKVLKNFLDIAEADVRSLISLYSEVGRSADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADAEKKKLEKEALKERTANNLHSKKDGVR 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01997 1168 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Gma09g01997 1168 Gene3D Formin, FH2 domain 756 1141 IPR042201 -
Gma09g01997 1168 MobiDBLite consensus disorder prediction 409 432 - -
Gma09g01997 1168 Gene3D Protein tyrosine phosphatase superfamily 15 191 IPR029021 -
Gma09g01997 1168 Coils Coil 934 954 - -
Gma09g01997 1168 MobiDBLite consensus disorder prediction 807 830 - -
Gma09g01997 1168 ProSiteProfiles Formin homology-2 (FH2) domain profile. 755 1155 IPR015425 -
Gma09g01997 1168 SMART it6_source 523 1165 IPR015425 -
Gma09g01997 1168 MobiDBLite consensus disorder prediction 1133 1168 - -
Gma09g01997 1168 MobiDBLite consensus disorder prediction 547 735 - -
Gma09g01997 1168 Gene3D - 197 342 - -
Gma09g01997 1168 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Gma09g01997 1168 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Gma09g01997 1168 SMART PTEN_C2_2 198 338 IPR014020 -
Gma09g01997 1168 Pfam Formin Homology 2 Domain 760 1130 IPR015425 -
Gma09g01997 1168 SUPERFAMILY Formin homology 2 domain (FH2 domain) 686 1149 - -
Gma09g01997 1168 MobiDBLite consensus disorder prediction 496 534 - -
Gma09g01997 1168 Coils Coil 1130 1153 - -
Gma09g01997 1168 Coils Coil 1036 1063 - -
Gma09g01997 1168 MobiDBLite consensus disorder prediction 469 761 - -
Gma09g01997 1168 MobiDBLite consensus disorder prediction 807 822 - -
Gma09g01997 1168 PANTHER FORMIN-J 1 678 - -
Gma09g01997 1168 PANTHER FORMIN-J 669 1159 - -
Gma09g01997 1168 MobiDBLite consensus disorder prediction 409 431 - -
Gma09g01997 1168 MobiDBLite consensus disorder prediction 469 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01997 Gma-Chr9 45574060 45583286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01997 717 1167 FH2 protein (formin) Gene Family AT1G31810 76.211 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01997 - - gmx:100781274 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01997 09 45574060 45583286 Gma09g01997 09 45574060 45583286 ECH