Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01991 ATGCATCCAAATTTGCAGCTTCAGCATGACCTGGCCATAGCTGGCCAACCCTGGGCGTGTACCTGTAAAAGGATTGAAAAGCTGCTGTTCTTGCGCGTGAACAAGCCTCAGGTAAGCCAAAACCATGCACGGAAGACAAGGAGACGATTGGCTCGTCAGAAGAAAGCTGTGAAGATATTCCCCAGACCTACGGCTGGACCTCTCAGGCCCATTGTACATGGTCAAACTTTGAAATACAACATGAAAGTGAGAGGTGGAAGGGGATTTTCTCTTGAAGAACTCAAGGCAGCAGGGATTCCCAAAAAGCTTGCACCAACCATAGGTATTGCTGTTGATCATCGTCGCAAGAACCGTTCTTTGGAAAGTCTGCAAGCTAATGTGCAGAGGCTGAAAACATACAAGGCCAAATTGGTTGTGTTCCCAAGACGGGCACACAAGGTTAAGGCTGGTGATTCTACTCCCGAGGAGCTTGCAAATGCAACACAAGTCCAGGGTGCTTTCTTGCCTATTGTGAGGGAGAAGCCAACTGTTGAACTTGTAAAGGTTACAGATGACATGAAGGCATTTAAAGCTTATTACAAGCTTCGTCTTGAACGCACAAACAAACGCCATCATGGTGCCAGACTGAAGAAGGCTGCTGAAGCAGAAAAGGAAGACAAAAAGTGA 666 0.47 MHPNLQLQHDLAIAGQPWACTCKRIEKLLFLRVNKPQVSQNHARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKVRGGRGFSLEELKAAGIPKKLAPTIGIAVDHRRKNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVQGAFLPIVREKPTVELVKVTDDMKAFKAYYKLRLERTNKRHHGARLKKAAEAEKEDKK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01991 221 Hamap 50S ribosomal protein L13e [rpl13e]. 59 142 IPR001380 GO:0003735|GO:0005840|GO:0006412
Gma09g01991 221 Pfam Ribosomal protein L13e 41 199 IPR001380 GO:0003735|GO:0005840|GO:0006412
Gma09g01991 221 Gene3D - 181 221 - -
Gma09g01991 221 PANTHER 60S RIBOSOMAL PROTEIN L13 41 221 IPR001380 GO:0003735|GO:0005840|GO:0006412
Gma09g01991 221 PANTHER 60S RIBOSOMAL PROTEIN L13 41 221 - -
Gma09g01991 221 ProSitePatterns Ribosomal protein L13e signature. 84 98 IPR018256 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01991 Gma-Chr9 45504693 45510641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01991 43 206 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 86.585 4.95e-102 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01991 K02873 - gmx:100305489 330.102