Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01986 ATGGAGTCCAGTGAGGATGGGAGCATGTCATATAGAGAGTTCCATGCGAATGGAAGCCGCATGGTTACATCAGAAGTTGAGGCCAAGCTTGATGAAGGAAATATTCAAGAGGCAGAAGATGCATTGCGAGAAGGGTTGTCGCTCAATTTTGAGGAAGCAAGAGCTCTTCTTGGAAAGTTGGAGTATCAGAGAGGTAATGTAGAAGGTGCTCTTCGTGTGTTTGATGGGATTGATCTCCAAGCTGCCATACAGAGATTGCAACCTTCCTTTTCTGAAAAAACACCAGTCAAGAAAGGTCGCACTCGCACTGAATCACCCTCCTCAGTCTCTCAGCATGCTGCTAGTTTGGTGCTTGAAGCCATCTACTTAAAATCGAAGTCTCTGCAAAAACTGGGGAAATTTACTGAGGCTGCTAATGATTGTAAACGTATTCTTGATGCCGTTGAGAAGATATTTTATCTAGGTGTTCCTGATATTCAAGTGGATAATAGATTGCAAGAAATAGTCAGCCATGCAGTTGAGCTCCTTCCAGAGCTTTGGAAACAAGCTGGTTGCTACGATGAGGCAATCTCTGCTTATAGGCGAGCCCTTCTTAGTCAATGGAACCTTGATAATGATTGCTGTGCAAGAATTCAGAAGTCATTTGTTATTTTTTTGCTATACAGTGGGGTGGAGACAAGTCCACCTAGTTTAGCAGTTCAGATTGATGGATCATATGTGCCTAAAAATAATCTTGAAGAGGCTATTCTGCTATTGATGAATTTTTTGAAAAATTTTTGCCTTGGCAAGATGAAATGGGATCCTTCAGTCATGGAACACCTGACTTTTGCACTTTCTATATGTAGTGGAACTACTGTTTTAGCAAAGCAACTTGAAGAATTGAATCCTGGAGTATACCATCGAATTGATTGTTGGAATACTTTAGCTTTATGTTATAGTGGAGCTGGACAAAATGACAGTGCTTTGAATCTGCTAAGGAAGTCTTTGCACAAACATGAACGACCAAATGACCTTACATCATTGTTGTTAGCAGCCAGGATCTGCAGTGAGGATCCCTATCTTGCTGCTGAGGGAGTGAACCATGCACAGAGGGCAATCAGTAATGCTCACGGCCCAAATGAGCATTTAAAAGGTGTTGCTCTTCGGATGTTGGGACTTTGTTTGGGAAAGCAAGCTAAGGTCGCTTCCTCTGACTTTGAGAGGTCTCGCCTTCAGTCCAAAGCTCTGGAGTCATTGGTGGCGGCAATTAGATTGGAGCCAAACAATTCTGATCTGATTTTTGAATTGGCTGTTCAGTATGCAGAGCACCGAAATTTGCCTGCTGCTTTGCGTTCCGCGAGGCATTTCTTTAACAAAACAGGTGGTTCTGTATCGAAAGCTTGGAGATTGCTTGCTCTAATTTTGTCTGCACAACAAAGATTTTCAGAAGCTGAAGTGGTGACAGATGCTGCTTTAGATCAAACTTCAAGATGGGAGCAGGGGCCACTGCTTAGGCTGAAAGCAAAGTTGAAGATCTCCCAATCACGACCCATGGATGCTATTGAAACTTATCAGTACCTTCTTGCATTGGTTCAAGCCCAGAAGAAATCCTTTGGGTCTCTCCAAATTAGTTCAAAGGTTGAGTATGATAAAGTAAATGAATTTGATATTTGGCATGGTCTGGCAAATTTATATGCTAGTCTTTCTCATTGGAAGGATGCTGAAATCTGTTTGCAAAAGGCCAGGGAGTTGAAGGAATACTCTGCAGCATTGATGCACACTGAAGGCAAGACCAAATCCTTTTGTGTTTTGTTTGAAGGACGTGGGCAAAATGAAGAAGCTCTTTGTGCTACTATTAATGCTATACTACTCGAACCAAACTATGTTCCATGCAAGATCTTGATGGGTGCTTTGTTTCAAAAATTGGGTACAAAGCATTTGGCTATTGCAAGAAGCTTACTGTCTGATGCACTCCGAATAGAACCCACAAACCGCAAGGCTTGGTATAACTTGGGATTGCTTCACAAACATGAGGGCCGAATAAGTGATGCTGCCGACTGCTTCCAAGCAGCTTCCATGCTCGAAGAATCTGATCCCATCGAAAGTTTTAGCTCTTTACCTTGA 2103 0.4246 MESSEDGSMSYREFHANGSRMVTSEVEAKLDEGNIQEAEDALREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPSFSEKTPVKKGRTRTESPSSVSQHAASLVLEAIYLKSKSLQKLGKFTEAANDCKRILDAVEKIFYLGVPDIQVDNRLQEIVSHAVELLPELWKQAGCYDEAISAYRRALLSQWNLDNDCCARIQKSFVIFLLYSGVETSPPSLAVQIDGSYVPKNNLEEAILLLMNFLKNFCLGKMKWDPSVMEHLTFALSICSGTTVLAKQLEELNPGVYHRIDCWNTLALCYSGAGQNDSALNLLRKSLHKHERPNDLTSLLLAARICSEDPYLAAEGVNHAQRAISNAHGPNEHLKGVALRMLGLCLGKQAKVASSDFERSRLQSKALESLVAAIRLEPNNSDLIFELAVQYAEHRNLPAALRSARHFFNKTGGSVSKAWRLLALILSAQQRFSEAEVVTDAALDQTSRWEQGPLLRLKAKLKISQSRPMDAIETYQYLLALVQAQKKSFGSLQISSKVEYDKVNEFDIWHGLANLYASLSHWKDAEICLQKARELKEYSAALMHTEGKTKSFCVLFEGRGQNEEALCATINAILLEPNYVPCKILMGALFQKLGTKHLAIARSLLSDALRIEPTNRKAWYNLGLLHKHEGRISDAADCFQAASMLEESDPIESFSSLP 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01986 700 Pfam Tetratricopeptide repeat 659 690 IPR019734 GO:0005515
Gma09g01986 700 Gene3D Tetratricopeptide repeat domain 534 693 IPR011990 GO:0005515
Gma09g01986 700 SMART tpr_5 458 491 IPR019734 GO:0005515
Gma09g01986 700 SMART tpr_5 302 335 IPR019734 GO:0005515
Gma09g01986 700 SMART tpr_5 118 151 IPR019734 GO:0005515
Gma09g01986 700 SMART tpr_5 548 581 IPR019734 GO:0005515
Gma09g01986 700 SMART tpr_5 658 691 IPR019734 GO:0005515
Gma09g01986 700 Gene3D Tetratricopeptide repeat domain 238 533 IPR011990 GO:0005515
Gma09g01986 700 Gene3D Tetratricopeptide repeat domain 23 220 IPR011990 GO:0005515
Gma09g01986 700 ProSiteProfiles TPR repeat profile. 658 691 IPR019734 GO:0005515
Gma09g01986 700 PANTHER PROTEIN NPG1 1 699 IPR043376 -
Gma09g01986 700 SUPERFAMILY TPR-like 406 684 IPR011990 GO:0005515
Gma09g01986 700 SUPERFAMILY TPR-like 49 197 IPR011990 GO:0005515
Gma09g01986 700 PANTHER CALMODULIN-BINDING PROTEIN 1 699 - -
Gma09g01986 700 SUPERFAMILY TPR-like 118 443 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01986 Gma-Chr9 45482398 45488335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01986 12 699 Calmodulin-binding Proteins AT2G43040 71.676 0.0 977
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01986 K21843 - gmx:100814609 1355.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01541 01 50942232 50946879 Gma09g01986 09 45482398 45488335 GST