Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01976 ATGGGTATTGTTGCTGACAATACATCAGTTACTGGAGGAAGTGCTGCTTTGTGTTCCACGGGAACAATGGAGAGGTACAAGTTAATTAAGGAAATTGGTGATGGGACGTTTGGGACTGTCTGGAGAGCTATTAATAAGCAAACTGGTGAAGTTGTTGCTATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTACGAAAAATGAATCACCCAAATATTGTGAAGCTGAAAGAAGTTATTCGAGAAAGTGATATCTTGTACTTTGTTTTTGAGTACATGGAATGCAACCTATACCAACTCATGAAAGACAGGGAAAAACTATTTTCTGAAGCTGAAGTTAGAAATTGGTGTTTTCAAGTTTTTCAAGGTCTTGCTTACATGCACCAGCGTGGATACTTCCATCGTGACCTGAAGCCTGAAAACTTGCTGGTTACCAAGGATTTCATCAAAATCGCTGATTTTGGACTAGCCCGAGAAATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGATGGTATCGTGCTCCTGAAGTGCTGCTTCAGTCTTATATGTATACCTCTAAAGTTGATATGTGGGCAATGGGTGCTATAATGGCTGAGCTTTTCTCTCTTCGTCCTCTTTTCCCAGGTGCCAGTGAAGCGGATGAGATTTACAAAATATGTGGTGTGATAGGCAATCCAACCTTTGAATCATGGGCGGATGGACTCAAACTTGCAAGGGATATTAACTACCAGTTTCCACAGCTTGCCGGTGTGCATCTTTCTGCTTTGATTCCGTCTGCTAGTGATGATGCAATCAGCCTTATTACATCACTTTGCTCCTGGGATCCCTGCAAGAGGCCAACAGCTTCAGAGGCTCTTCAACATCCTTTCTTCCAGAGTTGCTTTTACATTCCTCCATCCCTTCGCAACAGAGCAGTAGCAAGAACTCCTCCACCTGCTGGAACCAGAGGAGCACTGGATCAGCAAGAGGTCAAGAGATATTCCGGTGCTTTACCTACTTCAAAGCTCTCCAATAATTTTTCTTCCATGAAATTACATCCTCCTTTAGCTTCAGGTGTGCAACGGAAGCTTGATATGGTAAATCAGGATGGAATTAAGAACGAAAAGCCAGTGAGGACTACTAAACCAAAATATCGACAGCCAGGAAAGGACAGCAGCCCAACTTCTATGAGCAAAGGGAGGTCTGTACGTGGGGTTTCAGAGACAGCTGAAAAGTTGCGCAATTTGTCAGTTACCAATCGAAGACAATCATCAATAGGAATAGGGCAACCCCGTCCTCCTCCACCAATGAAGGCTGGAGGGAATTGGATTTCTGAATCTGGAAACTTCATCCTTGGGCCCGCACAGCAGATTTCGACTGGAAGAACTTTCGCAAGAAAAGTTGCCGGATGA 1434 0.4365 MGIVADNTSVTGGSAALCSTGTMERYKLIKEIGDGTFGTVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKLFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDFIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYMYTSKVDMWAMGAIMAELFSLRPLFPGASEADEIYKICGVIGNPTFESWADGLKLARDINYQFPQLAGVHLSALIPSASDDAISLITSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRNRAVARTPPPAGTRGALDQQEVKRYSGALPTSKLSNNFSSMKLHPPLASGVQRKLDMVNQDGIKNEKPVRTTKPKYRQPGKDSSPTSMSKGRSVRGVSETAEKLRNLSVTNRRQSSIGIGQPRPPPPMKAGGNWISESGNFILGPAQQISTGRTFARKVAG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01976 477 Pfam Protein kinase domain 26 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01976 477 Gene3D Phosphorylase Kinase; domain 1 17 104 - -
Gma09g01976 477 MobiDBLite consensus disorder prediction 349 368 - -
Gma09g01976 477 MobiDBLite consensus disorder prediction 376 449 - -
Gma09g01976 477 ProSiteProfiles Protein kinase domain profile. 26 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01976 477 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 23 414 - -
Gma09g01976 477 SUPERFAMILY Protein kinase-like (PK-like) 21 309 IPR011009 -
Gma09g01976 477 MobiDBLite consensus disorder prediction 419 434 - -
Gma09g01976 477 Gene3D Transferase(Phosphotransferase) domain 1 105 310 - -
Gma09g01976 477 SMART serkin_6 26 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01976 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Gma09g01976 477 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 23 414 - -
Gma09g01976 477 MobiDBLite consensus disorder prediction 376 393 - -
Gma09g01976 477 MobiDBLite consensus disorder prediction 394 410 - -
Gma09g01976 477 CDD STKc_MAK_like 26 305 - -
Gma09g01976 477 ProSitePatterns Protein kinases ATP-binding region signature. 32 56 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01976 Gma-Chr9 45403103 45408362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01976 23 312 Core Cell Cycle Gene Families AT3G48750 37.919 2.92e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Gma09g01976 Pkinase 6.4e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01976 K08829 - gmx:100810838 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01976 09 45403103 45408362 Gma09g01976 09 45403103 45408362 ECH
Gma01g01534 01 50842526 50847024 Gma09g01976 09 45403103 45408362 GST