Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01964 ATGGAGGGTGGAGGAAGAGAAGGTTACAATGGAATTGTGATGACGATGACACGAGACCCAAAGCCGAGGCTACGGTGGACGGCAGATCTTCATGACCGCTTTGTGGATGCAGTCAAAAAGCTTGGTGGCCCTGATAAGGCGACTCCCAAGTCTGTTCTGAGGTTAATGGGCTTGAAAGGGCTGACACTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAGCAAGCTCGGAAACAAAATGAGGATATGCACAAAGAAAATAATAGATGTTCGTATGTAAATTTTAGCAATCGTTCTTCAGCACCTAACACCAGTTACAGAGGTGATGATGAAGGGGGAGAAATCCCAATAGCAGAAGCAATGAGGTGTCAGATTGAAGTTCAAAAGAGATTGGAAGAGCAGCTAGAGGTACAGAAGAAATTGCAGATGAGAATAGAGGCACAAGGGAAGTATTTGCAAGCCATGTTAGAGAAAGCACAGAGAAGCCTTTCCCTGGATGGGCCAGGCAGTCTTGAAGCATCGAGAGCTCAGTTGACTGAATTCAACTCTGTTTTGTCAAATTTCATGGAAAATATGAAAAAAGATAGCAAAGAAAACATAATAGAAGTGAGTGATTTTTATAGTAAGAGCCACGACTCAGCTTTCCATTATCAGGAAGTAGGGAGAGACCAAAAGCCCAAGGTTGAAGGGGGTTCAATTCAATTTGACTTAAACATCAAAGGTAGCAATGACCTTGTATGTGCAGGTGGAGCTGAAATGGATGCCAATATGATTTCATATAGGGTATAA 798 0.4236 MEGGGREGYNGIVMTMTRDPKPRLRWTADLHDRFVDAVKKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNEDMHKENNRCSYVNFSNRSSAPNTSYRGDDEGGEIPIAEAMRCQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQAMLEKAQRSLSLDGPGSLEASRAQLTEFNSVLSNFMENMKKDSKENIIEVSDFYSKSHDSAFHYQEVGRDQKPKVEGGSIQFDLNIKGSNDLVCAGGAEMDANMISYRV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01964 265 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 21 76 IPR006447 GO:0003677
Gma09g01964 265 Pfam Myb-like DNA-binding domain 24 74 IPR001005 -
Gma09g01964 265 Pfam MYB-CC type transfactor, LHEQLE motif 119 164 IPR025756 -
Gma09g01964 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 78 IPR017930 -
Gma09g01964 265 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 248 - -
Gma09g01964 265 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 248 IPR044848 GO:0003700
Gma09g01964 265 Coils Coil 131 151 - -
Gma09g01964 265 Gene3D - 20 78 - -
Gma09g01964 265 SUPERFAMILY Homeodomain-like 21 78 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01964 Gma-Chr9 45287392 45290655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01964 13 184 G2-like Transcription Factor Family AT4G13640 51.412 6.60e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma09g01964 Myb_DNA-binding 3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01964 - - gmx:100819756 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00088 01 966778 969285 Gma09g01964 09 45287392 45290655 GST