Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01938 ATGGCAGAAGCAGAATCCGAAGCTCTGCGCCTCAAGGCCATGGCGGAGTCCAAGTTCAAAGGCTCCAACAATAACGCCAAATCCGCTCTAAAGTACGCTAAGCGCGCCCACCGCCTCTGCCCGCACCTCGCCGGTGTGTCGGAGACCGTCGCCGCCCTCTCCGTCCTCGCCGCGCCAGATTGGTACCGCGCCCTAGGCGCAGAGCCCTTCGCCAGCAGCAGCGTCATCCGAAGGCAGTACAAGAAGCTCGCCCTGCTCCTCCACCCCGACAAGAACCCCCACGTGGCTTCCGAGGAGGCCTTCAAGCTCCTCGGCGAGGCCTTCAGCTTTCTCTCCGACAGAAACCGCCGCCGCGAGTACGACGCCAAGCTTCGACGTAAAATCGAGGCGGCTGAGATCGAGAGCGAGACGTTCTGGACTGCTTGCTCCACTTGCAGGCTCCTGCACCAGTTTGAGCGGAAGTACCTGGGGCAGGAATTAGTGTGTCCGAGTTGTGAGAAGAGTTTTAGGGCTGTGGAAGCGGCTCAGAGTGATGATGATGACGATGATGATGATGGGGATATTAGGGTTAGGAGTAGGAGGTTGAAGTTGAAAGAGATGGAGAAGAGGGAAATTGGGGTGAAAGGGGAAGTGGGTGGTGAGAAAGGTAATGAATTGGGGAGTGAGAAGGAAGGGAGATTGAGGAAGAGAATGTGTTCGGTTGGGGAGGTTTTGGAGAGGGCTAAACCTAGTAATAGTAAGAGGGTTAAAAATGGAGAGGAAATGATGACATTGGCTGAATTTCAGAATCAAGTGAAGAGAAAATTGCAGGAGGGAAAGTTGaaggaaaaagaaaaagaaaaggaaaaggaaaaggaGGAGGAGGGAATTGAGAAGAGGAGAAACCCCGCGGAGAGGAGGCGGCGGCGGTTGGGATTGAGAAATAATGGAGGTTTAGAGGATGGGGAGGTGAGGGGTTTGAAGAAGAGTGTGAAGCCTGCGATTGAGGAGAAGAGGAAGGGGTTGATAATTGAGAAGCATAGGGGGGGTTCTAGTGGAGGGGAGTTGGAGACTATGGCGGTGGTGGATTCTGATTTTTATGATTTTGACAAAGATAGAGTTGGAAGAAGCTTTAAGAAAGGCCAAGTGTGGGCGGTGTATGATGATGATGATGGAATGCCGAGGAATTATGCCTTGATTGATGAAACTGTCTCGGTGAATCCTTTTGGAGTGAGGATAAGTTGGTTGGATGTACAGAACAGTGGGGATGGGAGGATTGTTAGTAGGGAGAAAATGGGGTTTCATATACCTTGTGGGAGATTTAAGGTTGCCAGGAGGAAGGCTTCTGTAAATTCGGTGAATATCTTTTCTCATGTTGTGGATTGTGACCGGGCTGCACGTGAGGTTTACAAAATTTACCCCAAGAAGGGCTCCGTATGGATGCTTTATGGCGAGGGTAGTATTGATGCGGATGAGGGTAAGGGATGCTATGACATTGTTGTGTTTTTGACGAGTTACAATGAGGTGAATGGTCTGAGTATGGCGCATCTTGAGAAGGTTGATGGTTACAAGACAGTATTTAAGAGGCTGGAGAGGGGGAGCGGTGCTATTAGATTTCTTGGGAAGGATGACATGTGGTTAGTTTCACATCAGATTCCTGCACGGAAGCTTCTTTGTGATGAAACTCCTGAACTGTTGAAAGATTGTTGGGAACTTGATCCTGCTTCACTTCCTTCTGATTTACTTACTATTGGTGGATAG 1740 0.4931 MAEAESEALRLKAMAESKFKGSNNNAKSALKYAKRAHRLCPHLAGVSETVAALSVLAAPDWYRALGAEPFASSSVIRRQYKKLALLLHPDKNPHVASEEAFKLLGEAFSFLSDRNRRREYDAKLRRKIEAAEIESETFWTACSTCRLLHQFERKYLGQELVCPSCEKSFRAVEAAQSDDDDDDDDGDIRVRSRRLKLKEMEKREIGVKGEVGGEKGNELGSEKEGRLRKRMCSVGEVLERAKPSNSKRVKNGEEMMTLAEFQNQVKRKLQEGKLKEKEKEKEKEKEEEGIEKRRNPAERRRRRLGLRNNGGLEDGEVRGLKKSVKPAIEEKRKGLIIEKHRGGSSGGELETMAVVDSDFYDFDKDRVGRSFKKGQVWAVYDDDDGMPRNYALIDETVSVNPFGVRISWLDVQNSGDGRIVSREKMGFHIPCGRFKVARRKASVNSVNIFSHVVDCDRAAREVYKIYPKKGSVWMLYGEGSIDADEGKGCYDIVVFLTSYNEVNGLSMAHLEKVDGYKTVFKRLERGSGAIRFLGKDDMWLVSHQIPARKLLCDETPELLKDCWELDPASLPSDLLTIGG 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01938 579 SUPERFAMILY Chaperone J-domain 53 124 IPR036869 -
Gma09g01938 579 CDD DnaJ 60 113 IPR001623 -
Gma09g01938 579 Gene3D DnaJ domain 51 144 IPR036869 -
Gma09g01938 579 Pfam Domain of unknown function (DUF3444) 350 551 IPR024593 -
Gma09g01938 579 SMART dnaj_3 59 116 IPR001623 -
Gma09g01938 579 ProSiteProfiles dnaJ domain profile. 60 124 IPR001623 -
Gma09g01938 579 Pfam DnaJ domain 60 121 IPR001623 -
Gma09g01938 579 PANTHER BNAC03G44070D PROTEIN 6 578 - -
Gma09g01938 579 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 6 578 - -
Gma09g01938 579 PRINTS DnaJ domain signature 62 80 IPR001623 -
Gma09g01938 579 PRINTS DnaJ domain signature 80 95 IPR001623 -
Gma09g01938 579 PRINTS DnaJ domain signature 96 116 IPR001623 -
Gma09g01938 579 Coils Coil 267 294 - -
Gma09g01938 579 MobiDBLite consensus disorder prediction 270 295 - -
Gma09g01938 579 MobiDBLite consensus disorder prediction 270 307 - -
Gma09g01938 579 ProSitePatterns Nt-dnaJ domain signature. 101 120 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01938 Gma-Chr9 45007074 45008993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01938 6 176 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.798 1.78e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01938 - - gmx:100814434 1042.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01938 09 45007074 45008993 Gma09g01938 09 45007074 45008993 ECH
Gma01g00118 01 1338507 1340350 Gma09g01938 09 45007074 45008993 GST
Gma16g01114 16 27992961 27996915 Gma09g01938 09 45007074 45008993 PCT
Gma02g00383 02 3996898 4000407 Gma09g01938 09 45007074 45008993 PCT