Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01930 ATGCCCTTTCAACCTTTTCCTTCCATGAAAGAAGAAGATGGGATCTTGCGAGGGAAGGAAGAGATTGAGAGTGGATCAGGGAGTGAACAATTAGTTGAAGACAAGTCAGGGAATGAACAAGAGAGTCATGAACAACCCACAAAGAAGAAACGTTATCACAGGCACACTGCTCGCCAGATCCAAGAAATGGAAGCTTTGTTCAAGGAATGTCCACACCCGGATGATAAGCAGAGACTGAAACTGAGCCATGAATTGGGTCTTAAACCGCGCCAGGTCAAGTTCTGGTTCCAGAACCGTCGAACCCAGATGAAGGCACAACAAGACCGTGCAGATAATGTGATACTTAGAGCTGAGAATGAGTCTCTTAAGAGTGAGAATTATCGGTTACAAGCTGCACTGCGTAACGTAATTTGTCCCAACTGTGGTGGCCCATGCATAATGGGTGCTGATATGGGCTTGGATGAACACCAAGTTCGCATTGAAAATGCCCGTTTAAGAGAAGAGTTAGAACGCGTGTGTTGTCTCACAACAAGATACACTGGGCGTCCAATACAAACAATGGCAACAGGTCCTACTCTAATGGCCCCTTCATTGGATTTGGACATGAGCATATACCCAAGGCACTTTGCGGATACCATTGCTCCTTGCACTGAAATGATTCCTGTGCCAATGTTGCCTCCCGAAGCTTCACCTTTTTCTGAGGGTGGTATCCTAATGGAAGAAGAGAAGTCTCTGACCTTGGAGCTTGCCGCTTCCTCCATGGCTGAACTTGTGAAGATGTGTCAGACAAACGAGCCACTTTGGATTCGAAGCACTGAGAGTGAAAGGGAAGTGCTCAATTTTGAAGAGCATGCAAGGATGTTTGCTTGGCCTCAGAATCTCAAGCATCGAAGTGAGCTAAGGACTGAAGCTAGCCGTGACACTTCTGTGGTTATAATGAATAGTGTAACTCTTGTTGATGCTTTCCTTGATGCTCAAAAATGGATGGAATTGTTTCCTACAATCGTTTCAAGAGCAAAAACTGTCCAAATCATATCTTCTGGTGCTTCCGGTCTTGCAAGCGGGACTCTTCAGCTGATGTACGCAGAATTCCAAGTTCTTTCTCCTTTGGTGTCCACTCGTGAGACTCATTTTCTTCGGTATTGTCAACAAAATGCTGAGGAGGGAACCTGGGCCATTGTTGATTTTCCTGTTGATAGCTTTCACCAAAATTTTCACCCTTCTTATCCTAGATACTGCAGGAGGTCCTCTGGCTGCGTGATTCAAGATATGCCAAATGGGTATTCAAGGGTAACATGGGTTGAGCATGCAAAAGTAGAAGAGAAGCCTGTGCATCAGATATTCTGCAACTATGTGTACAGTGGAATGGCATTTGGAGCACAGCGTTGGTTAGGAGTTTTGCAGAGACAATGTGAGAGGGTCGCAAGCCTCATGGCCAGAAACATATCAGATCTTGGAGCGATACCTTCGCCAGAAGCGCGAAAGAACTTGATGAAGCTAGCTCAAAGAATGATAAAAACGTTTAGCCTTAACATGAGTACCTCTGGTGGTCAATCATGGACAGCCATATCAGATTCCCCTGAAGACACTGTTAGAATCACAACTAGGAAAATCACAGAGCCTGGACAACCTAATGGCGTGATTCTAAGTGCAGTTTCAACTACTTGGTTGCCCTATTCTCACACCAAGGTCTTTGATCTCCTCAGGGATGAACGCCGCAGATCTCAGATGGATGCTCTTTCCAATGGGAACTCATTGAATGAAGTGGCTCATATTGCAAATGGCTCACATCCAGGAAACTGCATTTCTCTTCTTCGCATAAATGTAGCGAGCAACTCATCCCAGAACGTAGAGCTAATGCTGCAAGAGAATTGCACCGACCAATCTGGAAGCATAGTAGTGTACACAACCATCGACGTGGATTCGATCCAGCTAGCCATGAGTGGTGAGGACCCTTCTTGCATTGCACTTCTTCCCCAAGGCTTCAAGATAGTGCCAATGTCATCACCACCCAACAACGTTGACACACCCATCATCGATGCCGCAACAAACTCATCATCAGAGCCTCCTCCATCTCTCAACAACAACAACTCAGGTGGTTGCCTCCTGACAATGGGGCTGCAGGTTCTCGCGAGCACGATCCCTTCTGCAAAGCTCAACCTCTCGAGCGTCACCGCTATCAACAATCACCTTTGCAACACCTTGCACCAGATTGAAGCTGCTCTTTCTTCTTCTAGCTCCCATGAGAATGGCAATGGCTCTTTCCTTTGCACTGAACCCACCAAGCAGTGA 2292 0.4634 MPFQPFPSMKEEDGILRGKEEIESGSGSEQLVEDKSGNEQESHEQPTKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENESLKSENYRLQAALRNVICPNCGGPCIMGADMGLDEHQVRIENARLREELERVCCLTTRYTGRPIQTMATGPTLMAPSLDLDMSIYPRHFADTIAPCTEMIPVPMLPPEASPFSEGGILMEEEKSLTLELAASSMAELVKMCQTNEPLWIRSTESEREVLNFEEHARMFAWPQNLKHRSELRTEASRDTSVVIMNSVTLVDAFLDAQKWMELFPTIVSRAKTVQIISSGASGLASGTLQLMYAEFQVLSPLVSTRETHFLRYCQQNAEEGTWAIVDFPVDSFHQNFHPSYPRYCRRSSGCVIQDMPNGYSRVTWVEHAKVEEKPVHQIFCNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGAIPSPEARKNLMKLAQRMIKTFSLNMSTSGGQSWTAISDSPEDTVRITTRKITEPGQPNGVILSAVSTTWLPYSHTKVFDLLRDERRRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQENCTDQSGSIVVYTTIDVDSIQLAMSGEDPSCIALLPQGFKIVPMSSPPNNVDTPIIDAATNSSSEPPPSLNNNNSGGCLLTMGLQVLASTIPSAKLNLSSVTAINNHLCNTLHQIEAALSSSSSHENGNGSFLCTEPTKQ 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01930 763 PANTHER - 26 750 - -
Gma09g01930 763 ProSiteProfiles START domain profile. 239 476 IPR002913 GO:0008289
Gma09g01930 763 CDD START_ArGLABRA2_like 243 472 - -
Gma09g01930 763 Gene3D - 33 117 - -
Gma09g01930 763 ProSitePatterns 'Homeobox' domain signature. 81 104 IPR017970 GO:0000981|GO:0006355
Gma09g01930 763 ProSiteProfiles 'Homeobox' domain profile. 46 106 IPR001356 GO:0003677
Gma09g01930 763 SUPERFAMILY Homeodomain-like 37 107 IPR009057 -
Gma09g01930 763 MobiDBLite consensus disorder prediction 744 763 - -
Gma09g01930 763 SMART HOX_1 47 110 IPR001356 GO:0003677
Gma09g01930 763 MobiDBLite consensus disorder prediction 1 55 - -
Gma09g01930 763 SMART START_1 248 473 IPR002913 GO:0008289
Gma09g01930 763 Pfam START domain 249 473 IPR002913 GO:0008289
Gma09g01930 763 Pfam Homeodomain 49 104 IPR001356 GO:0003677
Gma09g01930 763 SUPERFAMILY Bet v1-like 240 475 - -
Gma09g01930 763 Gene3D - 250 457 IPR023393 -
Gma09g01930 763 SUPERFAMILY Bet v1-like 500 739 - -
Gma09g01930 763 MobiDBLite consensus disorder prediction 12 47 - -
Gma09g01930 763 CDD homeodomain 49 107 IPR001356 GO:0003677
Gma09g01930 763 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 26 750 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01930 Gma-Chr9 44920117 44926321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01930 29 745 Homeobox Transcription Factor Family AT5G46880 59.574 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma09g01930 START 1e-39 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01930 - - gmx:100812829 1493.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01930 09 44920117 44926321 Gma09g01930 09 44920117 44926321 ECH
Gma09g01930 09 44920117 44926321 Gma10g02254 10 50103897 50109347 ECH
Gma01g00127 01 1429912 1435617 Gma09g01930 09 44920117 44926321 GST