Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01905 ATGGCAATTGAAAACCAAGACAACACTGTCAGAGAAATCAAGCCAAAGAACAGGAGAATCATGGGTGCTGGAGGCCCTGatgatgacgacaataggtggccaccgtggttgaagccactgctgaaagagagcttctttgttcaatgcaagttgcatgctgactctcacaagagcgaatgcaacatgtattgcttggactgtatgaatggccctctctgctctctctgcctcgctcaccacaaggatcaccgtgcaatccagattaggaggtcctcataccatgatgtgatcagagtctctgagattcagaaggtgttggacatcactggtgtccaaacctacattatcaacagcgcaagggtggtgtttttgaacgagaggcctcaaccaaggccaggaaaaggggtcacaaacacttgtgaagtctgcgaacgtagccttcttgattctttccgcttctgttCTCTTGGTTGCAAGATTGTTGGAACATCTAAGAACTTCCAGAAGAGGAAGAAACAGTCAATGTTAATGTCATCAGATTCTGAGGACTCATACAGCAGCAACAGCGTCCATGGCCTTAAGAAAAACTTCAAAGTTCAGAGCTTCACACCATCCACACCACCCCCAACATCGGTTAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGTTGGACTAATCATAGAATATTAG 711 0.2039 MAIENQDNTVREIKPKNRRIMGAGGPDDDDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGPLCSLCLAHHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFQKRKKQSMLMSSDSEDSYSSNSVHGLKKNFKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMVGLIIEY 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01905 236 Pfam PLATZ transcription factor 89 160 IPR006734 -
Gma09g01905 236 MobiDBLite consensus disorder prediction 9 28 - -
Gma09g01905 236 MobiDBLite consensus disorder prediction 1 28 - -
Gma09g01905 236 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 232 - -
Gma09g01905 236 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01905 Gma-Chr9 44661737 44663445 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gma09g01905 PLATZ 4.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01905 - - gmx:100791221 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01905 09 44661737 44663445 Gma09g01905 09 44661737 44663445 ECH
Gma01g00936 01 30678946 30681445 Gma09g01905 09 44661737 44663445 GST