Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01892 ATGACGCACGTTAAGTTAGCCTGCTTGTCCATTATAAGTTTTAGTGTGATTCCATTGGAGGCACAaacacaacacaacacaacacaacacaacacaGAGAGTAGTGAGTTTGTGACAAATCCTCTGTCGTTATCTCAACCTCTCTCAAAACTTTGCGAAAACACGATGGGAGATGTGGCAAAGGACCTAACAGCTGGGACTGTTGGAGGGGCAGCACAATTGATAGTTGGACACCCATTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCAACACCACTCCCCGGCCAGTTTCCCAGGTATTCTGGTGCAATTGATGCTGTCAAGCAGACAGTGGCAGCTGAAGGGCCAAGAGGTTTATACAAGGGTATGGGAGCCCCACTTGCCACAGTAGCTGCCTTCAATGCTGCCCTGTTTACAGTTAGGGGACAAATGGAAGCATTACTGATGTCACATCCTGGTGCTACCCTCACAATAAATCAGCAGGTTGTTTGTGGAGCTGGAGCTGGAGTTGCTGTTTCTTTCCTAGCTTGCCCAACTGAATTGATCAAATGCAGATTACAGGCACAAAGTGTGCTAGCTGGTACTGGAACAGCTGCAGTGGCAGTGAAATATGGGGGACCTATGGATGTGGCCAGGCAAGTTCTCAGGTCAGAAGGGGGCGTAAAAGGTCTTTTCAAGGGCTTGGTTCCCACCATGGCACGTGAAGTACCTGGAAATGCTGCAATGTTTGGTGTATATGAAGCATTAAAGAGATTACTTGCCGGTGGCACTGATACCTCAGGACTGGGTAGAGGTTCTCTGATGCTTTCTGGAGGCTTGGCTGGAGCTGCTTTCTGGCTCGCAGTTTACCCAACTGATGTCGTTAAGAGTGTGATTCAAGTAGATGATTACAAAAACCCGAAGTTCTCTGGTTCAATTGATGCTTTCAGAAGAATTTCAGCTTCTGAGGGGATCAAGGGCCTTTATAAGGGTTTTGGTCCTGCGATGGCCCGAAGTGTTCCTGCCAATGCAGCTTGCTTCTTGGCTTATGAGATGACAAGATCAGCTCTGGGATGA 1059 0.4684 MTHVKLACLSIISFSVIPLEAQTQHNTTQHNTESSEFVTNPLSLSQPLSKLCENTMGDVAKDLTAGTVGGAAQLIVGHPFDTIKVKLQSQPTPLPGQFPRYSGAIDAVKQTVAAEGPRGLYKGMGAPLATVAAFNAALFTVRGQMEALLMSHPGATLTINQQVVCGAGAGVAVSFLACPTELIKCRLQAQSVLAGTGTAAVAVKYGGPMDVARQVLRSEGGVKGLFKGLVPTMAREVPGNAAMFGVYEALKRLLAGGTDTSGLGRGSLMLSGGLAGAAFWLAVYPTDVVKSVIQVDDYKNPKFSGSIDAFRRISASEGIKGLYKGFGPAMARSVPANAACFLAYEMTRSALG 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01892 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 263 350 IPR018108 -
Gma09g01892 352 Gene3D Mitochondrial carrier domain 23 151 IPR023395 -
Gma09g01892 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 157 253 IPR018108 -
Gma09g01892 352 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 56 352 - -
Gma09g01892 352 SUPERFAMILY Mitochondrial carrier 58 345 IPR023395 -
Gma09g01892 352 Pfam Mitochondrial carrier protein 269 351 IPR018108 -
Gma09g01892 352 Pfam Mitochondrial carrier protein 59 151 IPR018108 -
Gma09g01892 352 Pfam Mitochondrial carrier protein 158 255 IPR018108 -
Gma09g01892 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 57 148 IPR018108 -
Gma09g01892 352 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 56 352 - -
Gma09g01892 352 Gene3D Mitochondrial carrier domain 152 352 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01892 Gma-Chr9 44545632 44549909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01892 77 346 Antiporters AT1G79900 32.971 9.42e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01892 K15109 - gmx:100787332 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01892 09 44545632 44549909 Gma09g01892 09 44545632 44549909 ECH
Gma01g00957 01 33138237 33141903 Gma09g01892 09 44545632 44549909 GST