Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01882 ATGGCTTTTATTTATGCTGCTGCTGTTGTTGGCTGTGCTTCTtcttcttcctctcccgctgtttccgaaaatcatgatgttttcatcagctttcgaggagaggatactcgcggtgacttcacaagccatcttcatgccgctctgtgcagaaacggcatccagacctacatagactacaggatccagaaaggatacgaggtttggccacaacttgtgaaagctatcagagagtccactctcttgttggttatcttctcagagaactatgcgtcttctagttggtgcttgaatgaactcgttgagctaatggagtgcaagaaacaaggagaagaagacgttcatgtacgcaaacagagtgggagttatcacacggcattggcgaaacacaagaaggattggaaggtgagtaaggagaagatgcaaaaatggaaggacgctctctttgaagcagccaatttatctggcttccattctcaaacatacagGACTGAACCTGACTTGATTGAAGACATTATTATAGATGTTTTGCAAAAACTAAATCATAGGTACACAAATGACTTTAGAGGCCTTTTCATATCTGATGAAAACTATACAagcattgaatctttactgaaaactgattcaggggaagttcgagtcattggaatttggggcatgggaggtattgggaaaacaactcttactgctgctatttttcacaaggtttcctctcagtatgaaggaacttgcttcttagaaaatgaggcagaggaatcaagaaggcacggactaaattacatatgcaacagactttttttccaagttactaagggagatcttagtattgacactcctaaaatgataccctctactgttacaagaagactcaggcacaagaaagttttcattgtactagatgatgtgaatactcctcgacttttagaatatttgattggagtggattgtgactggctaggagctggtagcagagtcattgtgacaaccagagataagcatgtacttatacgtggagaagttgacaaaattcataaagtcgaggaaatgaactttcagaactcccttaaactttttagcttaaatgcctttggcataacctatcctaaaaaggaatatgtggagtcgtcaaaaagagctatggtttatgccaaaggaatccctttagctttgaaagtcttgggatcatttcttcgttccaaaaccgaaaatgaatgggatagtgcactaagtaaattgaagaaaattcccaatacagaagttcaggcggtgttcagattgagttatgatggattagatgatgatgagaaaaacatttttctagacatagcttgtttttttaaaggaaaaaaaagtgactatatagggataagaagtcttttagacaaagctcttatcactactacttcatataataatttcatagatatgcatgatctgttacaagaaatcgagaaattgttcgtgaagaatGGAACTGGTGCAGTTGAAGGGATATGGTTGGATATGACTCAAATTACAAATGTAAATTTAAGCTCCAACGCATTTAGAAAGATGCCAAACCTGAGATTACTTGCTTTCCAAACTCTCAATCGAGACTTTGAGAGAATTAATTCTGTGTACCTTCCAAATGGTATTGAATTCTTTCCTAAAAACTTAAGATATTTTGGGTGGAATGGTTATGCATTAGAATCTCTACCATCAATGCGATACAGCAATGTGGAAAAACTTTGGCATGGAGTACAGaatctgccaaatttagagacaattgaccttcatggctccaaactccttgtagaGAAACATGAACTTGATGCTTTGTTCACCTTGCATAAGGTACTGCCTAGCTCTGGCTTCCAATCAGTAACAAGTCTAATCTTTTACGATTGTCAAAGCTTGTGCGAAATCCCAGATAACATCTCCTTGTTATCATCATTGCAATACTTAGGACTCTATTATAGTGCCATCATAAGCTTACCCGAAAGCATGAAGTATCTGCCAAGACTCAAACTTCTTGATGTTGGTGAATGCAAAATGCTTCAACGTATACCTGCACTTCCACGATCCACTCAGTGCTTGCATGTCTGGAACTGCCAATCTCTTCGGACAGTGTTAAGTTCAACGATTGAACCATCCAAAAGACCTAAGTGTACTTTTCTGCTCCCTAACTGTATAAAATTGGATGAAGATTCATATGAAGCAATTTTGAAAGATGCCATTGTAAGGATTGAAATTGGAGCAAAACCACCATCAGAGGCAGTATTAAAAAATGAAGATGCATCCACGGATAATGATGACAATCAAGTGTATACTTCTTATGTGTATCCATCTCCTTATTTGTATGCATCAGCTAGAAATGGTAAGATTTGCTACTATTTACCAGCTAGAAGAGGCAAAATTCGAGACCGGTTCCATTGGCACTTTACACAAGCTTTGATAACTATTGAACTTCCTCCTAATTTGTTGGGTTTCATTTTCTACTTGGTTGTTTCTCAAGTCCAATCATGCCACATTGGACGCCATGGAAGTATTGGATGTGAATGCTACTTGGAAACTGACCGGGATGAAAGGATCAGCATAACAAGTTTCTTTGTAGATGAGGAATGCGTCTTGCTTCATCCTAAATCTCCATTTGAATTTATGGCAGATCATGTATTTTTATGGTATGATGCACAATTTTACAAGCAGCTGATGGAAGTAATTAAAGAGAGGAAAACCATTAATGACAAGAGCACCTCTCATGATCCAAAGCTTACAATTCAATTCTTTGCTCAAACCCAATATAACGAGGAAGCAGTGATCACAAAAGAGTGTGGGTTTCGTTGGATGTATTCCTTAGAAGAAGGAGGAAGTAAATCCAAGAGAAGCAGGGAAATTGATCATAAACTAGAAGCCAATGTTGTCTGA 2901 0.1999 MAFIYAAAVVGCASSSSSPAVSENHDVFISFRGEDTRGDFTSHLHAALCRNGIQTYIDYRIQKGYEVWPQLVKAIRESTLLLVIFSENYASSSWCLNELVELMECKKQGEEDVHVRKQSGSYHTALAKHKKDWKVSKEKMQKWKDALFEAANLSGFHSQTYRTEPDLIEDIIIDVLQKLNHRYTNDFRGLFISDENYTSIESLLKTDSGEVRVIGIWGMGGIGKTTLTAAIFHKVSSQYEGTCFLENEAEESRRHGLNYICNRLFFQVTKGDLSIDTPKMIPSTVTRRLRHKKVFIVLDDVNTPRLLEYLIGVDCDWLGAGSRVIVTTRDKHVLIRGEVDKIHKVEEMNFQNSLKLFSLNAFGITYPKKEYVESSKRAMVYAKGIPLALKVLGSFLRSKTENEWDSALSKLKKIPNTEVQAVFRLSYDGLDDDEKNIFLDIACFFKGKKSDYIGIRSLLDKALITTTSYNNFIDMHDLLQEIEKLFVKNGTGAVEGIWLDMTQITNVNLSSNAFRKMPNLRLLAFQTLNRDFERINSVYLPNGIEFFPKNLRYFGWNGYALESLPSMRYSNVEKLWHGVQNLPNLETIDLHGSKLLVEKHELDALFTLHKVLPSSGFQSVTSLIFYDCQSLCEIPDNISLLSSLQYLGLYYSAIISLPESMKYLPRLKLLDVGECKMLQRIPALPRSTQCLHVWNCQSLRTVLSSTIEPSKRPKCTFLLPNCIKLDEDSYEAILKDAIVRIEIGAKPPSEAVLKNEDASTDNDDNQVYTSYVYPSPYLYASARNGKICYYLPARRGKIRDRFHWHFTQALITIELPPNLLGFIFYLVVSQVQSCHIGRHGSIGCECYLETDRDERISITSFFVDEECVLLHPKSPFEFMADHVFLWYDAQFYKQLMEVIKERKTINDKSTSHDPKLTIQFFAQTQYNEEAVITKECGFRWMYSLEEGGSKSKRSREIDHKLEANVV 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01882 966 Gene3D Ribonuclease Inhibitor 474 713 IPR032675 -
Gma09g01882 966 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 156 IPR035897 -
Gma09g01882 966 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 31 954 - -
Gma09g01882 966 Gene3D - 20 181 IPR035897 -
Gma09g01882 966 SMART till_3 24 153 IPR000157 GO:0007165
Gma09g01882 966 ProSiteProfiles TIR domain profile. 23 179 IPR000157 GO:0007165
Gma09g01882 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 441 IPR027417 -
Gma09g01882 966 Gene3D - 348 431 IPR042197 -
Gma09g01882 966 Pfam TIR domain 25 185 IPR000157 GO:0007165
Gma09g01882 966 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31 954 IPR044974 GO:0006952
Gma09g01882 966 PRINTS Disease resistance protein signature 288 302 - -
Gma09g01882 966 PRINTS Disease resistance protein signature 382 396 - -
Gma09g01882 966 PRINTS Disease resistance protein signature 213 228 - -
Gma09g01882 966 PRINTS Disease resistance protein signature 662 678 - -
Gma09g01882 966 Gene3D - 182 342 IPR027417 -
Gma09g01882 966 SUPERFAMILY RNI-like 498 701 - -
Gma09g01882 966 Pfam NB-ARC domain 200 419 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01882 Gma-Chr9 44405742 44409850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01882 22 692 WRKY Transcription Factor Family AT4G12020 26.904 1.09e-62 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01882 - - gmx:100809954 1060.44