Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01878 ATGACTCAAGCCAATGGCCACCATCGTGTTGATCAAACAGTGATTGACATAAAGAAACCGCCGGTGAGCTTCACTGGGGGTCTGGTGTTCGAGTGCCTCACTTACACCGTTACAAAGAAGAAAAAGGTTGAGGGGAAGTGGTCGAATGAAGAGGTGGATTTGCTGCATGATATCACCAGCTATGCACCAAAGGGTTGCATCACTGCAGTGATGGGCCCTAGTGGAGCAGGAAAGTCCACTCTCTTGGATGGCCTTGCTGGGAGGATTGCGAGTGGGAGCCTCAAAGGGAGGGTCTCCTTGGATGGTGCGACTGTGAGTGCAAGCTTGATCAAGAGAACTTCTGCATATATCATGCAGGAAGACAGGCTTTTCCCAATGCTCACCGTCTATGAGACTTTGATGTTTGCTGCTGATTTTCGTCTGGGGCCACTCTCACTTGCTGATAAGAAGCAGAGGGTGGAGAAGCTCATTAACCAGCTTGGCTTATCGTCATCTCAAAACACCTACATAGGAGACGAAGGTACAAGAGGAGTCTCCGGCGGAGAGCGGCGTCGGGTTTCAATCGGCGTGGACATCATCCACGGCCCATCCCTCCTCTTCCTGGACGAGCCAACCTCGGGGCTAGACTCCACCAGTGCCCACAGCGTGATCGAGAAAGTGCATGACATCGCCCGCAGCGGTAGCACGGTGATCCTCACCATCCACCAGCCCTCATCCAGAATCCAGCTCCTCCTCGACCACCTTATCATCCTCGCACGCGGCCAGCTCATGTTCCAAGGCTCGCCCCAAGACGTGGCACTCCACCTGAGTCGCATGCCACGCAAAATTCCCAAAGGAGAGAGCCCCATCGAGCTTCTCATTGATGTGATTCAAGAGTATGACCAGTCTGAGGTTGGAGTTGAAGCACTTGCTGAGTTTGCACGCACTGGAGTGAAGCCACCTCCTTTGTCTGAACAACTACACTCTCTGTCTTCTGTTGCACCCTCACCTGCTCCGTCCTCGCACCTTGGCCATAGGTATGGGGAGAAATCTCAGGACTTTTCTTACTCGTCGCAAGTGAGTAGAAGGGTCGTGGATGATTTTGATCACAGTCTCAGAAGTCCCTATAACAACAATACATCAATGTCGTGGAGCACTGGGAATAGTGCGGCGTTTTTGAAATTCACTCCTTCGCGGCTTAAGAATGATCACAAGCTGCAGAATACCGCAAGAAGCAATGCTTCACCTGGCTACTACACATACTCGAGTGAAATCCTCCAAGCCACTCCAACACCCCATAGCAGTGACTACACAGTGAATGAGAATGACTACATCACTGCCTCAAACGCCACACACGAACACCTTGGCCCAAAGTTTGCAAATTCCTACATAGGAGAGATTTGGATCCTTATGCGTCGCAACTTCATAAACATAAGGCGCACCCCTGAACTCTTCCTTTCAAGACTCATGGTTCTCACCTTCATGGGCATCATGATGGCCACAATGTTCTTCAAGCCAAAAGAAACATTGCAAGGAATCACCAACCGCCTCAGCTTCTTCATCTTCACAGTGTGCCTCTTCTTCTTCTCTTCCAACGACGCCGTCCCGGCCTTCATCCAAGAAAGGTTCATCTTCATAAGGGAAACCTCTCACAACGCCTATAGAGCTTCCACTTACACCATTGCAGGCATAATCACTCACATGCCATTCATTCTTCTCCAAGCAACTTCTTATGCTGTCATTGTTTGGTTTGCCCTAAAACTTCGAGGCCCTTTTCTTTACTTCTTGCTTGTTCTCTTCGTTTCTCTTCTTTCAACCAATTCATTTGTTGTGTTTGTGAGCTCAGTTGTTCCAAATTACATCCTTGGTTATGCTGTGGTTATTGCCTTCACTGCCTTGTTCTTCTTGTTCTGTGGATACTTCTTAAACAGCCAGGACATTCCCCATTTTTGGCGTTGGATGAACAAAATTTCAACCATGACGTACCCTTATGAGGGGCTCTTGATGAACCAGTATCAGACCAATGATACCTTTGGGTTTGGGTATCTTGATGGTGCAGCCATTACTGGTTTTGATATCTTGAAAAGTCTACATATTGACATTCTTGAACGTAGGAAGAGGACAATTGTGCTTATAATGTTTGGTTGGGCTGTGCTATATAGGGTTTTGTTTTACTTGGTCCTTCGTTTTGCATCAAAAAACCAGAGGTCGTAG 2193 0.4829 MTQANGHHRVDQTVIDIKKPPVSFTGGLVFECLTYTVTKKKKVEGKWSNEEVDLLHDITSYAPKGCITAVMGPSGAGKSTLLDGLAGRIASGSLKGRVSLDGATVSASLIKRTSAYIMQEDRLFPMLTVYETLMFAADFRLGPLSLADKKQRVEKLINQLGLSSSQNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARSGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSPQDVALHLSRMPRKIPKGESPIELLIDVIQEYDQSEVGVEALAEFARTGVKPPPLSEQLHSLSSVAPSPAPSSHLGHRYGEKSQDFSYSSQVSRRVVDDFDHSLRSPYNNNTSMSWSTGNSAAFLKFTPSRLKNDHKLQNTARSNASPGYYTYSSEILQATPTPHSSDYTVNENDYITASNATHEHLGPKFANSYIGEIWILMRRNFINIRRTPELFLSRLMVLTFMGIMMATMFFKPKETLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASTYTIAGIITHMPFILLQATSYAVIVWFALKLRGPFLYFLLVLFVSLLSTNSFVVFVSSVVPNYILGYAVVIAFTALFFLFCGYFLNSQDIPHFWRWMNKISTMTYPYEGLLMNQYQTNDTFGFGYLDGAAITGFDILKSLHIDILERRKRTIVLIMFGWAVLYRVLFYLVLRFASKNQRS 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01878 730 Gene3D - 40 272 IPR027417 -
Gma09g01878 730 MobiDBLite consensus disorder prediction 317 345 - -
Gma09g01878 730 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 28 278 IPR003439 GO:0005524
Gma09g01878 730 Pfam ABC-2 type transporter 459 665 IPR013525 GO:0016020|GO:0140359
Gma09g01878 730 ProSitePatterns ABC transporters family signature. 178 192 IPR017871 GO:0005524
Gma09g01878 730 Pfam ABC transporter 55 206 IPR003439 GO:0005524
Gma09g01878 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 266 IPR027417 -
Gma09g01878 730 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 9 724 - -
Gma09g01878 730 SMART AAA_5 64 262 IPR003593 -
Gma09g01878 730 PANTHER ABC TRANSPORTER G FAMILY MEMBER 19 9 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01878 Gma-Chr9 44374149 44377629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01878 48 261 Calmodulin-binding Proteins AT2G36910 30.594 6.22e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01878 K05681 - gmx:100804809 1375.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00184 01 2028733 2032278 Gma09g01878 09 44374149 44377629 GST