Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01877 ATGATGGAGTTACCAGATATTTGGATATTAAGACTGGTTGTGGCATGTGTTTTTTGTCTGCATATATTTATCAGATCGGCTTCTGGCTATGCAACTGAAGGGTTTGAAAACATAGCATGCTGTGCTGATTCAAATTATACAGATCCGCAAACCACCTTAAATTACACAACAGATTACAGATGGTTCCCTGATAAAGGAAGTTGCAGAAGAACTAAAGATGTGTTAAATGAAAAAGTTCGACTGTTTTTTGTAGATGAAGGAAAGAGATGTTACAATTTGTCAACAATTAAGAATAAAGTATATCTGATAAGGGGCACATTTCCATTCAACGGTGTAAATTCTTCCTTTAATGTTTCAATTGGGGTCACACAATTAGGTGCAGTGAGATCATCCGGGCTCCAGGACTTGGAGATTGAGGGAGTTTTCAGGGCTGCCAAAGACTACATAGACATATGCTTAGTGAAGGGAGAAGTGGATCCCTTGATTTCTCATATTGAATTAAGGCCATTGCCTGAAGAGTATCTACATGACTTGCCTGCCAGTGTTTTAAAACTGATAAGCAGAAATAGTCTTTGGGGCTCAAAAGATGAAATCAGGTTCCCAACTGACCCAAGTGATAGAATCTGGAAAGCAACTTCAAGTCCATCATCTGCTCTTCTAGTGTCTTCCAATGTCAGCAATTTTGACCTCAAATCCAATGTGACACCACCTCTACAAGTCCTACAAACGGCTCTTACCCACCCTGAGCGATTACAGTTCATGCACAGTGGCATTGATACGGAGGATAATGAATATCGTGTATTTCTCTACTTCCTTGAATTAAATAGCACTGTCAAAGCAGGCAAAAGGGTGTTTGACATCTATGTTAATGGTGAGATTAAAAAGGAGAGATTTGATATATTGGCTGAAGGGTCCAACTATACATACACTGTCTTGAACGTTTCAGCAAATGGATTACTTAATCTAACCTTGGTCAAGGCCTCAGGAGCTGAGTTTGGACCCCTTTTGAATGCTTATGAGATCCTGCAGATGCGATCATGGATTGAAGAGACCAACCACAAAGATGtggaagtgattcagaagattaaagaagaagtgTTGTTGCAAAATCAAGGCAATAAAGCACTAGAGAGTTGGACTGGAGACCCTTGTTTTTTCCCCTGGCAAGGAATAACATGTGACAGTTCAAATGGTTCGTCTGTTATCACTAAGCTGGATCTGTCTGCACATAATTTCAAAGGACCAATTCCTCCCAGTATCACTGAGATGATCAACTTAAAACTACTGAACCTGAGCCACAACAATTTCGATGGTTATATCCCCTCATTTCCACTGTCCTCCTTGTTAATATCAATAGATCTGAGCTACAATAATCTTATGGGATCACTTCCAGAATCAATTGTCTCACTGCCACATTTAAAATCGTTGTATTTTGGCTGCAACAAACGCATGAGCGAAGGAGGTCCAGCAAATTTGAACAGTTCACTAATCAATACTGACTACGGAAGATGCAAAGGAAAAGAACCTAGATTTGGACAAGTATTCGTCATTGGTGCTATTACATGTGGATCACTTTTGATTGCTTTGGCCGTTGGAATCATTTTTGTTTGCCGCTATAGACAAAAGTTGATTCCATGGGAAGGATTTGGTGGAAAGAACTACATAATGGAAACAAATGTAATATTCTCTTTGCCAAGCAAAGATGATTTCTTAATAAAGTCTGTATCAATTCAAACATTCACTTTGGAAGATATTGAGGTGGCCACAGAAAGGTACAAAACTTTGATTGGGGAAGGAGGATTTGGTTCTGTTTACCGTGGCACCCTAAACAACAGTCAAGAAGTGGCAGTGAAAGTCCGGTCAGCCACATCAACTCAAGGAACTCGAGAATTTGATAATGAGCTAAACCTACTTTCAGCAATACAGCATGAGAACCTGGTGCCTCTTCTTGGTTACTGTAATGAAAATGATCAACAAATTCTTGTGTATCCTTTCATGTCCAATGGTTCTTTGCAAGATAGACTCTATGGGGAACCTGCAAAGAGAAAAATATTAGACTGGCCAACTAGACTGTCTATTGCTCTTGGTGCAGCTCGAGGTTTGGCATATCTTCACACATTTCCAGGGCGTTCAGTAATACACAGGGACGTGAAATCAAGTAATATACTTCTAGATCATAGCATGTGTGCTAAGGTTGCCGATTTTGGTTTCTCAAAGTATGCTCCTCAGGAAGGAGACAGTAATGTTTCCCTTGAAGTAAGAGGAACTGCAGGGTACCTGGATCCTGAGTACTACAAAACCCAGCAATTATCTGAGAAGAGTGATGTCTTCAGCTTTGGCGTGGTTTTACTTGAAATTGTGAGTGGCAGGGAACCTCTCGACATAAAGAGACCCCGGAATGAGTGGAGCTTGGTTGAATGGGCTAAGCCATACGTTCGAGCATCAAAGATGGATGAAATTGTGGATCCTGGCATCAAGGGAGGATACCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACTGCATTGTCTTGAACCCTTCTCAGCATATAGACCAAACATGGTTGACATTGTGCGCGAGTTAGAGGATGCTCTCATCATAGAAAACAATGCATCAGAATACATGAAGTCCATAGACAGCCTTGGAGGATCCAACCGTTACTCTATTGTCATAGAGAAAAGGGTGCTGCCCTCAACTTCATCAACAGCAGAATCAACCATCACCACCCAAGCCTTATCCCATCCACAGCCAAGATAG 2760 0.4069 MMELPDIWILRLVVACVFCLHIFIRSASGYATEGFENIACCADSNYTDPQTTLNYTTDYRWFPDKGSCRRTKDVLNEKVRLFFVDEGKRCYNLSTIKNKVYLIRGTFPFNGVNSSFNVSIGVTQLGAVRSSGLQDLEIEGVFRAAKDYIDICLVKGEVDPLISHIELRPLPEEYLHDLPASVLKLISRNSLWGSKDEIRFPTDPSDRIWKATSSPSSALLVSSNVSNFDLKSNVTPPLQVLQTALTHPERLQFMHSGIDTEDNEYRVFLYFLELNSTVKAGKRVFDIYVNGEIKKERFDILAEGSNYTYTVLNVSANGLLNLTLVKASGAEFGPLLNAYEILQMRSWIEETNHKDVEVIQKIKEEVLLQNQGNKALESWTGDPCFFPWQGITCDSSNGSSVITKLDLSAHNFKGPIPPSITEMINLKLLNLSHNNFDGYIPSFPLSSLLISIDLSYNNLMGSLPESIVSLPHLKSLYFGCNKRMSEGGPANLNSSLINTDYGRCKGKEPRFGQVFVIGAITCGSLLIALAVGIIFVCRYRQKLIPWEGFGGKNYIMETNVIFSLPSKDDFLIKSVSIQTFTLEDIEVATERYKTLIGEGGFGSVYRGTLNNSQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNENDQQILVYPFMSNGSLQDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSNVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLDIKRPRNEWSLVEWAKPYVRASKMDEIVDPGIKGGYHAEAMWRVVEVALHCLEPFSAYRPNMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVIEKRVLPSTSSTAESTITTQALSHPQPR 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01877 919 Pfam Protein tyrosine and serine/threonine kinase 594 862 IPR001245 GO:0004672|GO:0006468
Gma09g01877 919 Gene3D Ribonuclease Inhibitor 352 506 IPR032675 -
Gma09g01877 919 Gene3D - 193 345 - -
Gma09g01877 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 712 724 IPR008271 GO:0004672|GO:0006468
Gma09g01877 919 SMART serkin_6 590 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01877 919 PANTHER OS05G0525400 PROTEIN 91 880 - -
Gma09g01877 919 SUPERFAMILY Protein kinase-like (PK-like) 571 862 IPR011009 -
Gma09g01877 919 ProSiteProfiles Protein kinase domain profile. 590 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01877 919 Pfam Malectin-like domain 42 343 IPR024788 -
Gma09g01877 919 CDD STKc_IRAK 596 863 - -
Gma09g01877 919 SUPERFAMILY L domain-like 372 484 - -
Gma09g01877 919 PANTHER OS07G0107800 PROTEIN-RELATED 91 880 - -
Gma09g01877 919 Pfam Leucine rich repeat N-terminal domain 354 394 IPR013210 -
Gma09g01877 919 ProSitePatterns Protein kinases ATP-binding region signature. 596 618 IPR017441 GO:0005524
Gma09g01877 919 Gene3D Phosphorylase Kinase; domain 1 562 665 - -
Gma09g01877 919 Gene3D Transferase(Phosphotransferase) domain 1 666 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01877 Gma-Chr9 44360762 44369093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01877 9 869 Receptor kinase-like Gene Family AT1G67720 32.889 4.89e-131 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gma09g01877 Malectin_like 3e-45 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01877 - - gmx:100780918 1812.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00185 01 2038281 2045855 Gma09g01877 09 44360762 44369093 GST