Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01865 ATGGCATCACAAGCTGAAATTGAGCATCCTAAGAAGGCATTTGGTTGGGCAGCTAGGGATCCTTCTGGTCTTCTCTCCCCTTTCAATTTCTCCAGAAGCGAAACTGGTGAAAAGGACGTGGCATTCAAAGTGTTGTATTGTGGGATATGCCACTCTGACCTCCACATGGTGAAGAACGAATGGGGCTTTTCCACCTATCCACTAGTCCCCGGGCATGAGATAGTTGGTGTAGTGACAGAGGTGGGAAACCAAGTAGAAAAGTTCAAAGTTGGGGACAAGGTGGGTGTGGGAGGCATGGTTGATTCATGCCGCAGCTGCCAAAACTGTGATGACAATCTTGAGATTTATTGTCCAAAATACACGTTCACATTTGGTGCCAAGCATAAAGATGGCACCACCACATATGGAGGCTTCTCTGACTCAATGGTTGCAGACGAACACTTTGTGGTTCGCATTCCTGATGGCTTACCACTTGATGCTGCTGCACCTCTCCTTTGTGCTGGCATCACTGTGTATAGCCCTCTCAGATATTTTGCCCTAGACAAGCCTGGAATACATGTTGGTGTGGTTGGTCTTGCTGGACTAGGTCATATGGCTGTCAAGTTTGCCAAAGCTTTTGGGGCTAAGGTCACAGTAATAACTAATAAGTACTTCACCCAACAAAAAGAAGGAAGCAATACAAAATCTTGGAGTTGA 696 0.4626 MASQAEIEHPKKAFGWAARDPSGLLSPFNFSRSETGEKDVAFKVLYCGICHSDLHMVKNEWGFSTYPLVPGHEIVGVVTEVGNQVEKFKVGDKVGVGGMVDSCRSCQNCDDNLEIYCPKYTFTFGAKHKDGTTTYGGFSDSMVADEHFVVRIPDGLPLDAAAPLLCAGITVYSPLRYFALDKPGIHVGVVGLAGLGHMAVKFAKAFGAKVTVITNKYFTQQKEGSNTKSWS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01865 231 Gene3D - 167 216 - -
Gma09g01865 231 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Gma09g01865 231 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Gma09g01865 231 PANTHER ALDEHYDE REDUCTASE 1 216 - -
Gma09g01865 231 Gene3D - 16 166 - -
Gma09g01865 231 CDD CAD1 14 214 - -
Gma09g01865 231 SUPERFAMILY GroES-like 19 184 IPR011032 -
Gma09g01865 231 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 216 - -
Gma09g01865 231 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 216 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01865 Gma-Chr9 44260433 44267228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01865 11 215 Monolignol Biosynthesis Gene Families AT4G37980 70.732 6.78e-100 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01865 - K23232 gmx:100816901 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01865 09 44260433 44267228 Gma16g00876 16 19566031 19576265 PCT
Gma16g00876 16 19566031 19576265 Gma09g01865 09 44260433 44267228 PCT