Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01864 ATGTCACCCGATGACACACCTTCAAAGCCTGCCACAGCAAAAGACCAAGAGACTCAAAGTTCCGGTGGTAGTGGCAGAAAAAGCTCCTCCACAAGGCCCCAAGAGCAAGGTCTCAATTGTCCACGATGTGACTCACCCAACACCAAATTCTGCTACTACAACAACTACAGCCTCACGCAGCCAAGGCATTTCTGCAAGACATGTAGAAGATACTGGACAAAAGGTGGTGCTTTGCGCAACGTTCCTATTGGCGGTGGTTGCAGAAAGAACAAGAAGGTGAAGTCATCAAGGCTATCATGTGACTCCAAGGACTCTGGTTCCTCCTCTTCAGAAGTTGGTGGACTCAAGTTCCTTCATTCTCTTTCTCCTTCCATGGACTTTCACCTTGGAGGGTTACCCTTCCCTAGGCTTCACCATCATCATCACCCTCCAACCACTTACAACCACTTTTCCTCTTTTGAAAACACTTCTAGTACTTCTTCATGTTTCAACCTTGACCCTTCTCCTGGCACCACCACCACCCTATCAAGTTCTTTTGCTGCTCTCTATAATTACCCTTTTTCTTACAATGGTGCAATCCAAGGTATGAGCTCTTTGAACGTTCATAGTGGCCTTGCCTCTTCCATTGAGTCTTTGAGTTCTATAAATCAGGACTTGCACTGGAAGCTTCAGCAGCAGCGATTGGCAATGCTCTTTGGTGGAGACAACAACCAGAAAGATCATAGTGGTGTTAACCAGATTGAGAACCAGACTCAGAAGCCACAAACCATTTTGTTTCAAAACCTTGAGATTTCAAAGCCAGGAACTTTACCAGTTGGGGACTCCAGAAAAGAACATGGTCCAAGTGGGGACACACACACGCCTTCAACCGAGTGGTTCTTTGGGAATTCCTATGCCTCAGTGACTCCAACACCTACTAGTAGTGGTGGTGGCCCAGGGAATAATGATAATGCAAGCAATTGGAGTAGCGGTGGTGGTGGTGTCCATGCTTGGGGTGATGTGCCGCAGCAATATAGTTCTTTGCCCTAA 1029 0.4694 MSPDDTPSKPATAKDQETQSSGGSGRKSSSTRPQEQGLNCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKVKSSRLSCDSKDSGSSSSEVGGLKFLHSLSPSMDFHLGGLPFPRLHHHHHPPTTYNHFSSFENTSSTSSCFNLDPSPGTTTTLSSSFAALYNYPFSYNGAIQGMSSLNVHSGLASSIESLSSINQDLHWKLQQQRLAMLFGGDNNQKDHSGVNQIENQTQKPQTILFQNLEISKPGTLPVGDSRKEHGPSGDTHTPSTEWFFGNSYASVTPTPTSSGGGPGNNDNASNWSSGGGGVHAWGDVPQQYSSLP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01864 342 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
Gma09g01864 342 Pfam Dof domain, zinc finger 37 92 IPR003851 GO:0003677|GO:0006355
Gma09g01864 342 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 342 IPR045174 GO:0003700|GO:0006355
Gma09g01864 342 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
Gma09g01864 342 MobiDBLite consensus disorder prediction 301 342 - -
Gma09g01864 342 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN-RELATED 16 342 - -
Gma09g01864 342 MobiDBLite consensus disorder prediction 301 324 - -
Gma09g01864 342 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01864 Gma-Chr9 44248279 44249307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01864 28 342 C2C2-Dof Transcription Factor Family AT5G65590 39.634 1.65e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma09g01864 zf-Dof 1.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01864 - - gmx:100777894 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00196 01 2180239 2181252 Gma09g01864 09 44248279 44249307 GST