Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01854 ATGGCAACCACGTATAATAACGTGAAAGAGTTTACGAGCGACGACGAGGCATCTCCGAGGGCGATTCTGGAGACCCCTGTTTCGGAAACAGAGTCAGACAACAGTGGAAGCAGCGAAAGCTTCAGTTCTGTCTCACCGGAGAAGTCGCAGGCGGTGACCGGAAAAGAGGTTCCCAAGGAAGGTTACGTGCAACAGTTGATGACCATGATCGACGTTTTCAAGTTCAAGTCTGTGAGAAAGTTAACGGCCGTTCCTCTGTTTGCGGTGGGCAATGATATCTCTCGGAAAGGGTTAACCAAAAAACTTGCCCGTATTCGAAGTGCTGAAGATGGTATTGATATTGGAGCTATTCCCACGAAACCCTCTTGGAGGAACTTCGATTATGAAGAGTTAGTTGCTGCTACTGGTGATTTTAGTTCTGAGAACTTGCTTGGGAAAGGTGGTCATGCTGAAGTGTACAAAGGCCACTTACCCGATGGTCAAGTTATAGCTGTAAAGAGGCTAATGAAGAATGAAAAGGATGCTGCAGACAGAGCTGGTGATTTCTTGACGGAGCTTGGGATCATTGCACACATAAACCACCCCAATGCGACACGCCTTATTGGGTTCGGGGTTGATCGTGGCCTCTACTTTGTCCTACAGCTTGCTTCGCATGGCAGTCTTTCTTCTTTGCTTTTCGGTTCTGAATGCttggactggaagataagatccaaggtagctgttggggtggcggatggattggtttatctccataaagagtgcccgagacgaatcattcatagggacatcaaggcctccaacatattactaaatgAAAACTATGAAGCTGAGATATCAGATTTTGGACTGGCAAAGTGGCTCCCAAGTAAGTGGACCAGCCACGTTGTCTTCCCAATAGAAGGAACATTTGGATATTTGGCTCCGGAGTACTTTATGCATGGAGTTGTGGATGAGAAAACTGATGTATTTGCCTATGGAGTTTTGCTTTTGGAGCTCATAACTGGTCGACGCGCTGTTGATTCGGATAGTAGACAAAGTCTTGTCATCTGGGCCAAGCCACTACTGGATACAAACAATGTAAAGGATTTAGCAGACCCCAGATTAGGAGAGGAATATGACCCTATTGAAATGAAGCGTGCCATGGTGACAGCTTCCAGGTGTGTCCACCATGTATCCTCCAAGCGGCCATACATGAATCAGGTTGTGCAGCTACTAAAGGGTGAAGAGACAATTATGGAACCAAAGAAAACTTTAGTTGCACAAAAGTCTCTCATGTTAGAGGCATGTGACCTAGAAGAAGATTATACTTGCTCAAGTTACTTGAAGGACCTCAATCGCCACAGGCAACTAATCATGGAGTAA 1362 0.417 MATTYNNVKEFTSDDEASPRAILETPVSETESDNSGSSESFSSVSPEKSQAVTGKEVPKEGYVQQLMTMIDVFKFKSVRKLTAVPLFAVGNDISRKGLTKKLARIRSAEDGIDIGAIPTKPSWRNFDYEELVAATGDFSSENLLGKGGHAEVYKGHLPDGQVIAVKRLMKNEKDAADRAGDFLTELGIIAHINHPNATRLIGFGVDRGLYFVLQLASHGSLSSLLFGSECLDWKIRSKVAVGVADGLVYLHKECPRRIIHRDIKASNILLNENYEAEISDFGLAKWLPSKWTSHVVFPIEGTFGYLAPEYFMHGVVDEKTDVFAYGVLLLELITGRRAVDSDSRQSLVIWAKPLLDTNNVKDLADPRLGEEYDPIEMKRAMVTASRCVHHVSSKRPYMNQVVQLLKGEETIMEPKKTLVAQKSLMLEACDLEEDYTCSSYLKDLNRHRQLIME 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01854 453 SUPERFAMILY Protein kinase-like (PK-like) 121 411 IPR011009 -
Gma09g01854 453 SMART serkin_6 138 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01854 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Gma09g01854 453 MobiDBLite consensus disorder prediction 25 50 - -
Gma09g01854 453 ProSiteProfiles Protein kinase domain profile. 138 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01854 453 Gene3D Phosphorylase Kinase; domain 1 116 213 - -
Gma09g01854 453 Gene3D Transferase(Phosphotransferase) domain 1 217 425 - -
Gma09g01854 453 PANTHER OS08G0249100 PROTEIN 7 453 - -
Gma09g01854 453 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 7 453 - -
Gma09g01854 453 Pfam Protein kinase domain 139 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01854 453 MobiDBLite consensus disorder prediction 1 56 - -
Gma09g01854 453 ProSitePatterns Protein kinases ATP-binding region signature. 144 166 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01854 Gma-Chr9 44162833 44167686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01854 126 401 Trihelix Transcription Factor Family AT1G68690 47.902 5.61e-73 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma09g01854 Pkinase 2.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01854 - - gmx:100775930 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00207 01 2277158 2282496 Gma09g01854 09 44162833 44167686 GST