Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01853 ATGGCTCGTGCTTCGACTAACTGGCTATCGTTCTCTCTCTCCCCCATGGAAATGCTCCGAACCCCCGAACCTCAGTTCGTTCAATACGACGCCGCTTCCGACACTTCCTCGCATCACTACTACCTCGACAACTTGTACACCAACGGGTGGGGGAACGGGAGCCTCAAGTTTGAGCAGAATCTGAACCACAGCGACGTGAGTTTCGTTGAATCGTCGTCGCAGAGCGTCAGCCACGCGCCGCCGAAGCTGGAGGATTTTCTCGGCGACTCCTCCGCTGTTATGCGTTACTCCGACAGCCAGACGGAGACGCAGGACTCGTCGCTGACGCAcatctacgaccaccaccaccaccaccaccaccaccaccaccacggttcttctGCGTACTTCGGCGGTGACCACCAGGATCTCAAGGCCATTACTGGATTCCAAGCTTTTTCGACTAACTCTGGCTCCGAGGTTGATGATTCTGCATCGATCGGAAAGGCGCAGGGCAGCGAGTTCGGGACTCACTCTATTGAGTCCTCCGTCAACGAGTTCGCCGCGTTCTCCGGTGGCACCAACACCGGTGGAACCTTGTCGCTCGCCGTCGCGCAGAGCTCCGAGAAGGCCGTCGCTGCTGCGGCGGAGTCCGATCGCTCGAAGAAGGTTGTGGATACCTTCGGCCAGCGGACTTCTATATACAGAGGTGTCACTAGGCACCGATGGACAGGAAGATATGAAGCGCATCTATGGGACAATAGTTGCAGAAGGGAGGGTCAAGCTAGAAAAGGGCGTCAAGGTGGATATGATAAGGAAGAAAAGGCCGCTAGATCTTATGATTTGGCAGCTCTGAAGTACTGGGGTCCCACTGCTACCACCAACTTCCCTGTTTCCAATTATTCAAAGGAAGTGGAGGAGATGAAACATGTAACAAAGCAGGAATTTATCGCATCATTGCGAAGGAAAAGTAGTGGTTTCTCCAGGGGAGCTTCCATATACAGAGGTGTTACAAGGCATCATCAACAGGGTAGGTGGCAAGCAAGAATTGGCCGTGTAGCTGGAAACAAAGATCTTTACTTGGGAACATTCGCAACCGAGGAGGAAGCAGCAGAGGCATATGATATTGCAGCCATTAAGTTCAGAGGTGCAAACGCGGTAACCAACTTTGAGATGAATAGATATGATGTGGAAGCTATAATGAAGAGTTCTCTTCCAGTGGGTGGGGCAGCAAAGCGCTTGAAGCTTTCCCTTGAATCAGAGCAGAAagctcttcctgtgagcagcagcagcagcagcaatcaacagcagAATCCACAGTGTGGAAACGTGAGTGCCAGCATCAATTTCTCATCCATTCATCAGCCAATTGCTTCTATCCCTTGTGGAATTCCCTTTGATTCAACAACAGCATATTATCATCACAACCTTTTCCAACATTTTCACCCTACCAACGCTGGCACAGCAGCGTCTGCTGTTACTTCTGCCAATGCAAATGCACTAACTGCACTGCCACCAACAGCAGCAGCTGAGTTCTTTATTTGGCCTCATCAGTCTTATTGA 1542 0.4792 MARASTNWLSFSLSPMEMLRTPEPQFVQYDAASDTSSHHYYLDNLYTNGWGNGSLKFEQNLNHSDVSFVESSSQSVSHAPPKLEDFLGDSSAVMRYSDSQTETQDSSLTHIYDHHHHHHHHHHHGSSAYFGGDHQDLKAITGFQAFSTNSGSEVDDSASIGKAQGSEFGTHSIESSVNEFAAFSGGTNTGGTLSLAVAQSSEKAVAAAAESDRSKKVVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEEKAARSYDLAALKYWGPTATTNFPVSNYSKEVEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMNRYDVEAIMKSSLPVGGAAKRLKLSLESEQKALPVSSSSSSNQQQNPQCGNVSASINFSSIHQPIASIPCGIPFDSTTAYYHHNLFQHFHPTNAGTAASAVTSANANALTALPPTAAAEFFIWPHQSY 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01853 513 PRINTS Ethylene responsive element binding protein signature 228 239 IPR001471 GO:0003700|GO:0006355
Gma09g01853 513 PRINTS Ethylene responsive element binding protein signature 366 386 IPR001471 GO:0003700|GO:0006355
Gma09g01853 513 SMART rav1_2 227 296 IPR001471 GO:0003700|GO:0006355
Gma09g01853 513 SMART rav1_2 326 390 IPR001471 GO:0003700|GO:0006355
Gma09g01853 513 CDD AP2 325 384 IPR001471 GO:0003700|GO:0006355
Gma09g01853 513 SUPERFAMILY DNA-binding domain 226 292 IPR016177 GO:0003677
Gma09g01853 513 SUPERFAMILY DNA-binding domain 325 385 IPR016177 GO:0003677
Gma09g01853 513 ProSiteProfiles AP2/ERF domain profile. 227 290 IPR001471 GO:0003700|GO:0006355
Gma09g01853 513 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 510 - -
Gma09g01853 513 CDD AP2 226 292 IPR001471 GO:0003700|GO:0006355
Gma09g01853 513 Pfam AP2 domain 326 376 IPR001471 GO:0003700|GO:0006355
Gma09g01853 513 Pfam AP2 domain 227 282 IPR001471 GO:0003700|GO:0006355
Gma09g01853 513 Gene3D AP2/ERF domain 227 292 IPR036955 GO:0003700|GO:0006355
Gma09g01853 513 Gene3D AP2/ERF domain 326 386 IPR036955 GO:0003700|GO:0006355
Gma09g01853 513 ProSiteProfiles AP2/ERF domain profile. 326 384 IPR001471 GO:0003700|GO:0006355
Gma09g01853 513 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 6 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01853 Gma-Chr9 44155861 44160802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01853 66 513 AP2-EREBP Transcription Factor Family AT5G10510 57.336 6.93e-170 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gma09g01853 AP2 1.1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01853 K09285 - gmx:100775390 929.472