Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01852 ATGGATGCAATCCAAACCGAGAAAATCTACGTTGCTGTTGGTAATGATGTGCAAGATGGACTTAAGACTTTGAATTGGGCTCTCAAGAAGTGGAATTCTCATCCAATTTCCATTGCTGTTCTCCATGTCACACACAATAGTACCAAGGATTATGTCTATACACCATTTGGGAAACTTCCTGCAAGATCTGTGAGTGAGGAGAAACTACAAATTCTCAGGAAAGATGAGCAGGATAAAATCAACAAGCTGCTTTCCAAGTATATTGCTTTTTGTGGCAAGGTGCCAGCAGAGATTCTTGAAGTTGAAAAATTTGATGAACCTATGCAAAAGCGCGTCATAGACTTGATCTTTGGTCTAGGAATAACCAAATTGGTCATGGGATTTTCATTCATGAAGCCATCCATGAAATCTAAAGGTGCTATTAGTGGATTGTTCTATGTTCATCAGCACAAGCCTTCCTTCTGTGAATTGTTCATTATTTGTGGAGGGAAACAAGTTTTCCTCAGAGGAAAAAATGATGAGAAAATCATGGAGGATGATCGCGGGGTCATGAGTGCAAGAATGAGAGATAAGGTAACTTTCAAAGATTGGTTAGACAAGTGGTTTAATGACAAAACCAACGATTCACAAGATAGAAGTACATCACTTTCCTCAACCAATTTGGAGTCCCCTCTGAACCAAAACCAGTGGGAATTTTACCTCCAGGAAATTGAAAAATACTATCAAGAATTGTTGTCTTCGAACTTGGAGGAAGGAAACTGCGTGCTAGAAAATGACGACTCACAGATTGGACCAATTGAGCCACATGTCACTGAACCCAACAATTATGATATGAGTGCTGCGGATAAAATTGAGATCCTGAAAAATAAGCTTAATGAAGCTCAGAAGATTATCCAATTAAAGAGGAAAGAAGCCAAGGATAATATAGAGAGGCATACTAAAGCTGAATGGGCAATTTGTTTATGCAACAGTCGGGCCGAAGAACTGGAAAGTCGAATACGAGAAGAGGCGAGTGCAAGAGAGGAGCTAAAGAAGGAATCAGACGCAGAGAAAGAGCAAACAGTGGAGATGAAAACGGAGCTGGAAGAGAGGAAGAGGAGCCTGAGATCCCTGACGGAAGTTCAATCGGAGCTCTCAAACAGGCTTCAAATATGGACGTTGGCGAAGACGCGGGCGGAGACGCAGCTGGAGAAGGCGGTGGGGGAGAGGAGCGAGATGGTGAGGGAGATAGAGGAGCTGAGGCGGCAGAGGGACGTGTTCAATCGGAGGATCGAGTTTTGCAAGGAGAAGGACGCCATCGGAATGGCCGCGAGCCTCGCCGAGATGACGTGCTGCGCATTCAGGGAGTACACCGAGGAGGAGCTCCGGTTGGCGACGGATAACTTCTCCGACCGCCTCAGGTTCAAGTCCGGCGGGGATTGGACTAATGTGTATAGAGGACGCTTTAACCATTCCTCTGTTGCTATCAAGATGCTTCCTTCTTTGTCACACCAACATTTCCAATCCAAGGTGAGGCTTCTTGGTGATATTAGGCAACCTCATCTGGTTGCCATGGTAGGCTTTTGCTCCGAGCCCAAATGCATAGTTTTGGAATACATGGGCAATGGAAGCTTACGTGACATGCTGTTTTCTAGGAGAAGAAACCGGGTCTTACGATGGCATGACCGAATACGAATAGCCACGGAAGTTTGTTCGGGTCTGGGCTTTCTCAATGCAGCTGAGTCGAGGCCCGCTATTCATTGTCATTTGAGCTCATCAAAAATCCTCTTAGACCGCAATTTGGTTGCAAAGATCACGGGCTTTGGGCTTCTTGAATGCCATGATGAGCAATGTAACGTTGAGTCAGATTTGCAAGCCATAGGGGTTTTGTTGATACATCTTCTGACGGGAAGAAATTGGGCCGGGCTCGTCGAGGAGGTGATGACAGTGGATATGGATAGGAAGGCTTTGGGTAGTGTTCTTGATGAGATGGCTGGACAATGGCCATTGGATCTTGCAAGGGAACTTGCTGCCCTGGCTATGAGGTGCATGTCCATCAAAGCCAAACCCAACTCAGAACTCAGCATTGCTAGGGTTTTAGAGGAACTCAATGAGATAAGAAGAAACGGGGATGAAATAGTTGAAAGGGAAGGGCCAAAGACAATTATTGGTGGATGTATAGATAGGGAGGGTTCCAGTGATATGCCTAGTGCTTTCCTTTGCCCCATACTTCAGGAGGCAATGACAAACCCACACGTGGCAGCAGATGGATTTTCTTATGAGCTAGAAGCAATAGAACACTGGCTGCAGTCGGGGCGTGACACATCACCAATGACAAATTTGAGGCTGAAGCACACATTCCTCACCCCTAATCACACCCTTCGTTCCCTAATTCAGGACTGGCAGACCAACAAATCAACCTAG 2403 0.4565 MDAIQTEKIYVAVGNDVQDGLKTLNWALKKWNSHPISIAVLHVTHNSTKDYVYTPFGKLPARSVSEEKLQILRKDEQDKINKLLSKYIAFCGKVPAEILEVEKFDEPMQKRVIDLIFGLGITKLVMGFSFMKPSMKSKGAISGLFYVHQHKPSFCELFIICGGKQVFLRGKNDEKIMEDDRGVMSARMRDKVTFKDWLDKWFNDKTNDSQDRSTSLSSTNLESPLNQNQWEFYLQEIEKYYQELLSSNLEEGNCVLENDDSQIGPIEPHVTEPNNYDMSAADKIEILKNKLNEAQKIIQLKRKEAKDNIERHTKAEWAICLCNSRAEELESRIREEASAREELKKESDAEKEQTVEMKTELEERKRSLRSLTEVQSELSNRLQIWTLAKTRAETQLEKAVGERSEMVREIEELRRQRDVFNRRIEFCKEKDAIGMAASLAEMTCCAFREYTEEELRLATDNFSDRLRFKSGGDWTNVYRGRFNHSSVAIKMLPSLSHQHFQSKVRLLGDIRQPHLVAMVGFCSEPKCIVLEYMGNGSLRDMLFSRRRNRVLRWHDRIRIATEVCSGLGFLNAAESRPAIHCHLSSSKILLDRNLVAKITGFGLLECHDEQCNVESDLQAIGVLLIHLLTGRNWAGLVEEVMTVDMDRKALGSVLDEMAGQWPLDLARELAALAMRCMSIKAKPNSELSIARVLEELNEIRRNGDEIVEREGPKTIIGGCIDREGSSDMPSAFLCPILQEAMTNPHVAADGFSYELEAIEHWLQSGRDTSPMTNLRLKHTFLTPNHTLRSLIQDWQTNKST 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01852 800 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 50-RELATED 5 796 - -
Gma09g01852 800 SMART Ubox_2 731 794 IPR003613 GO:0004842|GO:0016567
Gma09g01852 800 Pfam U-box domain 729 799 IPR003613 GO:0004842|GO:0016567
Gma09g01852 800 SUPERFAMILY Protein kinase-like (PK-like) 445 679 IPR011009 -
Gma09g01852 800 Coils Coil 284 308 - -
Gma09g01852 800 ProSiteProfiles U-box domain profile. 727 800 IPR003613 GO:0004842|GO:0016567
Gma09g01852 800 Coils Coil 396 430 - -
Gma09g01852 800 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 726 800 IPR013083 -
Gma09g01852 800 Coils Coil 326 364 - -
Gma09g01852 800 SUPERFAMILY RING/U-box 725 797 - -
Gma09g01852 800 Pfam Protein tyrosine and serine/threonine kinase 472 610 IPR001245 GO:0004672|GO:0006468
Gma09g01852 800 CDD RING-Ubox_WDSUB1_like 732 773 - -
Gma09g01852 800 PANTHER OS02G0152300 PROTEIN 5 796 - -
Gma09g01852 800 Gene3D Phosphorylase Kinase; domain 1 435 532 - -
Gma09g01852 800 ProSiteProfiles Protein kinase domain profile. 463 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01852 800 Gene3D Transferase(Phosphotransferase) domain 1 534 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01852 Gma-Chr9 44132125 44137867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01852 7 800 U-box Gene Family AT5G65500 50.871 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gma09g01852 PK_Tyr_Ser-Thr 7.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01852 - - gmx:100797367 1580.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00209 01 2323387 2328875 Gma09g01852 09 44132125 44137867 GST