Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01846 ATGGCTCTTCCCGGTTCCCTGCAGTTGTCCCATGGATTGGGACTTTGCAGGAACCTGGACTGCAGTAAACATTCGAGGGCTGCGGATCGTGGCAAATTACATTTATATAGTGCAGGTCCTTCATATCCTATTTCGTTCATGAGACAGGAATGCAGGGGTTTTCAACACCTTCGTCATATAAACAGGCCAGCACATACATTATCTTGCAAATCCCGCTCTTTTAAGTGTCATTGTTTTTTAGGCCAACCAAATGAGCTTCCTGCTGTTAAGGTGGCTGCTACAGTGTGGGCTAGGTCTTGTAATGTGTTACAAAATAGTCCTACCATAGTAAAGTTGATTCCTGCAGTTGGTGTTATCATTTTTGCAGTATGGGGTGTTGGTCCATTATTGTTTCAGACAAGGAAATTACTTTTTCAGAGGAGTGATAGTAGTTGGAAGAGAAGTACCACTTACTATATAATAAGTTCTTACCTTCAGCCATTACTGTTATGGACTGGAGCAATACTTATTTGCAGAGCATTGGAGCCATTAATCCTACCTTCAGAAACTAGCCAGGTTGTTAAGGAACGACTTTTGAATTTTGTAAGATCATTATCAACAGTACTGGCCTTCGCCTATTGTTTGTCAAGTGTAATTCAGCAAGCGCAGAAATTCTTAGCAGAGAGTACTGATGCAAGTGAGACGAGAAATATGGGATTCCAATTTGCTGGCAAAGCTGTTTACTCTGCGGTATGGATAGCTGCCTTTTCACTGTTCATGGAATTGCTGGGCTTCTCTACCCAGAAATGGGTTACTGCAGGAGGTCTTGGGACAGTTTTGTTGACCCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCGAGTGTGATGATTCATGCAACCCGGCCTTTTGTGGTTAATGAATGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACCGTCGAGCATGTTGGCTGGTGGTCACCAACAATTATTAGAGGTGAAGATCGTGAAGCTGTTCACATTCCAAACCACAAATTTACAGTGAATGTTGTGCGGAACCTTAGTCAAAAAACACATTGGCGAATCAAAACCCATCTAGCCATTAGTCATTTGGATGTAAATAAGATTAATAACATTGTTGCTGACATGAGGAAAGTCTTAGCCAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGAGTGTTTTTGGACAACATAAATCCTGAAAATCAGGCACTTTTGATTCTGGTGTCTTGTTTTGTTAAGACCTCACATTTTGAAGAATATCTGTGTGTTAAGGAAGCTGTACTGTTGGATCTTCTTAGAGTTATTGGCCATCACCGAGCCCGACTTGCCACACCAGTCCGTACCCTGCAGAAAATATACAGTGATGCTGACTTGGAGAACATACCATTTGCAGATTCGACATTTGGTCGTGGTGCTGGGACAGTACCTAACCGTCCATTATTAGTGATCGAACCATCTTATAAGATCAATGGAGATGATAAGAAAAGTCGATCGGCACGGCCAGCTGTTGATCAAGATAACAAGACAGCTACGCGAACCAAAGTTGACACTGAGGGGGATAACAAagttgtgacacctaactctgatgcaaatggaaactctaagacagttgtgactcctaaatctgatgcaaatggaaacactaagacagttgtgacACCCAAACCTGATCCTGAAGTGGGTGAAAACAAGCCACTGAAATCAGATTCAAGCAGGGAGAACGTGGAGGTGCCAGAATCTCCTTCTAAATCCAAAGTTACTGGTTTGGTAGTGGATAATTCAGCCCAGAAGGACGTAGATGTCAAACAATCCAAGGTTCATACTACTAAAAACACAAAGCCAAATATTGACTCTGACAATGTAGTGTCCTCCTCCTCAACTAACAATGCTGACAAAACTGGTGGATTTAATACGAATATGCCAATGAAACAGCAAGGGGAAAAGAAACCTGCTGCACAGCCTCATGCATCCAGGACTGTTCTTGAAGAGAATATAGTACTAGGTGTTGCATTGGAGGGATCAAAGAGGACACTTCCCATTGATGAAGAGATTGACAATGTGACATCTCGAGAGGCAAAGGAAATGGCTGCATTGCAGGGTGGAAATGGATCTCCAAAGGCTCCAGATGGAAATGACAACTAG 2160 0.4069 MALPGSLQLSHGLGLCRNLDCSKHSRAADRGKLHLYSAGPSYPISFMRQECRGFQHLRHINRPAHTLSCKSRSFKCHCFLGQPNELPAVKVAATVWARSCNVLQNSPTIVKLIPAVGVIIFAVWGVGPLLFQTRKLLFQRSDSSWKRSTTYYIISSYLQPLLLWTGAILICRALEPLILPSETSQVVKERLLNFVRSLSTVLAFAYCLSSVIQQAQKFLAESTDASETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLILVSCFVKTSHFEEYLCVKEAVLLDLLRVIGHHRARLATPVRTLQKIYSDADLENIPFADSTFGRGAGTVPNRPLLVIEPSYKINGDDKKSRSARPAVDQDNKTATRTKVDTEGDNKVVTPNSDANGNSKTVVTPKSDANGNTKTVVTPKPDPEVGENKPLKSDSSRENVEVPESPSKSKVTGLVVDNSAQKDVDVKQSKVHTTKNTKPNIDSDNVVSSSSTNNADKTGGFNTNMPMKQQGEKKPAAQPHASRTVLEENIVLGVALEGSKRTLPIDEEIDNVTSREAKEMAALQGGNGSPKAPDGNDN 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01846 719 MobiDBLite consensus disorder prediction 498 525 - -
Gma09g01846 719 MobiDBLite consensus disorder prediction 691 719 - -
Gma09g01846 719 SUPERFAMILY Sm-like ribonucleoproteins 281 351 IPR010920 -
Gma09g01846 719 MobiDBLite consensus disorder prediction 526 558 - -
Gma09g01846 719 MobiDBLite consensus disorder prediction 566 585 - -
Gma09g01846 719 MobiDBLite consensus disorder prediction 614 650 - -
Gma09g01846 719 Gene3D - 297 352 IPR023408 -
Gma09g01846 719 Gene3D - 190 295 - -
Gma09g01846 719 Pfam Mechanosensitive ion channel 238 444 IPR006685 GO:0016020|GO:0055085
Gma09g01846 719 MobiDBLite consensus disorder prediction 498 665 - -
Gma09g01846 719 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 719 - -
Gma09g01846 719 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 719 IPR045042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01846 Gma-Chr9 44085054 44091095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01846 9 709 Mechanosensitive Ion Channel Family AT5G10490 55.977 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01846 K22047 - gmx:100796304 1401.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00215 01 2375244 2382704 Gma09g01846 09 44085054 44091095 GST