Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01839 ATGGATGGCCTTGCAAATGGGGTTGCACTAGAGGAAGTAATCACAAGGGTTCAAGGGAAAGGGCGACGAAGGGATTTCTTTGGCCGCAAGGGAGCGGCTCGTGGGGGAAGTTATCTTGGTGGTCCTGGCGCTCCAAAGGAACCCGCCTCATCTACGAAACACACACACAGAGGAAACACAAGCGAATCGAGGGGTCACACGAGAGCCAATGCTTTCTCAGCACACGGATCGCTGACGTGGCGCGAGATCGTCGAAATCCCGCGTAAACCCGAAACTTCAATTTTTTCGCGAAGCGATTTTTTGTTTGCGTTTTCTCTACACTGCCCTTCCCGCAACCCCTTCTTATCCCCTCGCTCGCGCGCTCAAACCTCACAACACAACGCAACACAACGCGCACTCTCTCTTTTCTCTCTTAACACAAAAACCCTATCGTTCTTCGCGGTTTCGCCGATTCTCGCCATGCCGAAAGCCAAATCCGACGCCAAAGCCGCCGATAGCCGGTTGAAGCGCAAGGGCGCTGGTGCTGGAAGGAAGCAATCGAAGAAAGCTGCTAAGGATCCTAACAAGCCAAAGAGACCTCCAAGCGCTTTCTTCGTTTTCATGTCCGAGTTCAGAGAGCAGTTTAAGAAGGAGCATCCTAACAACAAATCCGTCGCTGTTgtcggtaaagctggtggtgacaaatggaaatcgctgtctgatgctGAAAAGGCCCCCTTCGTTGCCACGGCCGAAAAGAAGAAACAAGAGTATGAGAAAACTATTTTGGCTTACAATAAGAAATTGGAGGGGAAGAATTCAGAGGAAGACGAGTCTGACAAGTCAAAGTCTGAAGTCAATGACGATGAGGAAGATGAGGAGGAGGAGGATGATGATGACGACGAGTGA 888 0.482 MDGLANGVALEEVITRVQGKGRRRDFFGRKGAARGGSYLGGPGAPKEPASSTKHTHRGNTSESRGHTRANAFSAHGSLTWREIVEIPRKPETSIFSRSDFLFAFSLHCPSRNPFLSPRSRAQTSQHNATQRALSLFSLNTKTLSFFAVSPILAMPKAKSDAKAADSRLKRKGAGAGRKQSKKAAKDPNKPKRPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKAGGDKWKSLSDAEKAPFVATAEKKKQEYEKTILAYNKKLEGKNSEEDESDKSKSEVNDDEEDEEEEDDDDDE 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01839 295 SUPERFAMILY HMG-box 181 263 IPR036910 -
Gma09g01839 295 MobiDBLite consensus disorder prediction 25 71 - -
Gma09g01839 295 Coils Coil 241 268 - -
Gma09g01839 295 MobiDBLite consensus disorder prediction 258 274 - -
Gma09g01839 295 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 156 294 IPR031061 -
Gma09g01839 295 CDD HMGB-UBF_HMG-box 190 255 - -
Gma09g01839 295 Pfam HMG (high mobility group) box 190 259 IPR009071 -
Gma09g01839 295 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 156 294 - -
Gma09g01839 295 Gene3D High mobility group box domain 174 279 IPR036910 -
Gma09g01839 295 SMART hmgende2 189 260 IPR009071 -
Gma09g01839 295 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 190 259 IPR009071 -
Gma09g01839 295 MobiDBLite consensus disorder prediction 258 295 - -
Gma09g01839 295 MobiDBLite consensus disorder prediction 275 295 - -
Gma09g01839 295 MobiDBLite consensus disorder prediction 160 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01839 Gma-Chr9 44011567 44015960 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Gma09g01839 HMG_box 1.4e-22 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01839 K25507 K22507 gmx:100305957 213.386