Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01830 ATGGAGATTGCAACTCACCCGTGTCCATACGATATTGAATCTTTAAAATCACTTTCTGAACTTGATTTCAGTTATAGTGGTTTTCCCTCAATAGGAACCACCACTACCGATTCTACATCACCAAGTGCCGTTAACATAGGGGCAATTTTATCCTTCAACTCAACAATTGGCAAAGTGGCTAAAGTTGCTATACATGCAGCAGTGGATGACATAAATTCCAATGCAACAATTCTCAATGGAACTAAGCTTAATATAACATTGCTAGACACCAAACTATCCACTGGATTCCTAGGAATCATTGATTCATTTTTGTTGATGGAGAAAGACACTGTGGCCATAATTGGTCCACAGTACTCAGTCATGGCACATGTGATTTCACACATAGCAAATGAGATGCAAGTGCCTCTACTTTCATTTGCAGCAACGGATCCTACACTGACTTCACTGCAGTTCCCATATTTTGTTAGGACAACACAGAGTGATCTGTATCAGATGGCTGCTGTGGCAGAAATTGTTGATCACTTTCAATGGAGAGATGTCATAGCCATTTTCGTCGACGACGATCATGGAAGAAATGGGATAGCTGCCTTGGGGGACAAGCTAGCAGAGAAACGTTGTAAAATATCATATAAAGTACCATTTAAACCAGATAACATAAGCCACGAAGAAATAAACAGCGCATTAGTTAAGGTAGCTTTAATGGAATCAAGGGTAATAGTCCTTCACATATACCCTTCTTCAGGACTAGAAGTGCTCCATCATGCAGCTCAGTCACTTGGCATGATGGGAAGTGGTTATGTGTGGATAGCCACAGATTGGCTTTCCACAGTACTAGATTCAGAACCATCCTTGTTCTCATCTTCAGCCATGAATGACATCCAAGGAGTTATCACCTTGCGCATGCATGCACCAGATTCAGACATGAAAAAACAATTTGTTTCTAGGTGGAAAAAACTGAGCCAAAAAGAAGATTCTAATCAGGACCCTTTTGGGGTAAATATCTTTGGTCTTTACGCCTATGACACTGTGTGGTTGCTTGCTTCAGCACTCGATTCGTTTTTTAAGAGTGGTGGAACTTTGTCATTTTCAAATGATTCAAGCCTAAACATGTTAAGAGGGGACAGCCTTAACCTTGATACTATAGGGGTCTTTGTTAATGGTAGCATGTTGCTTCAAAAGATTTTAGAAGTGAACAGAACTGGTTTAACAGGCCAAATGATGTTTAGTCCTGATGGAAACTTGGTGCATCCATCATATGAAATCATTAATGTGATAGGCACTGGAATTAGGAGGATTGGTTATTGGTCTGAAACCTCGGGTCTTCACACTGGGGAAGGTCCTAATCACTCCAATTTCAGTGAGGGACTATTTGGTGTCATCTGGCCTGGCCAAACAACTCAAACCCCGCGTGGTTGGGTTTTCGCCAGCAATGGAAGACACTTGAGAATTGGGGTGCCACTCAGAATTAGTTACCGCGAGTTTGTGTCAAAAATCGAGGGAACTGAGATGTTTGGTGGTTATTGCATAGATGTGTTTACTGCTGCACTGAACTTGTTGCCTTATCCGGTACCATTCAAGTTTATTCCATTTGGTGATGGTAAAACCAACCCGTTAAATTTAGACCTTCTTCACATGATCACAACTGGTGCCTTTGATGCTGTGGTGGGGGACATTACCATTACTACAAACCGAACTAAGATAGCGGATTTTACACAGCCATATATTGAGTCTGGTCTAGTTGTTGTGGCTCCTATCAAGAAGCTGAAATCAAGTGCTTGGGCTTTCCTCACACCATTCACTCCAATGATGTGGTTTGTGACAGGAATGTTTTTCTTGGTGGTTGGAGCTGTTGTGTGGATTTTAGAGCGTCGCATAAATGATGACTTTAGAGGCCCTCCTAGAAGACAATTTGTCACCATTGTCTGTCTTACATCTCAGAAAAACACCTTCTATGCAGGAGAGAAAACTGTGAGCACCCTTGGTCGATTAGTGCTAATAATATGGCTTTTTGTGGTTTTGATACTCAACTCAAGCTACATTGCTAGCCTCACCTCCATCCTAACCGTGGAACAACTCTCTTCCCCGGTTAAAGGAATTGAAAGCCTAGTAATAAGCAGCGACCGCATCGGTTTCCTGAGGGGTTCATTTGCTGAGAATTATCTGACAGAGGAGCTCAACATACACAGGTCCAGGCTTGTTCCTCTCAACTCGCCATCAGAATATGAAAAAGCCTTGAAGGATGGTCCTGCTAATGGCGGTGTTGCTGCAATAATAGATGAACGTGCGTATATGGAGCTCTTCCTAGCGACCAGATGTGAATTTGGTATCGTTGGTCAAGAGTTCACCAAGATGGGATGGGGTTTTGGCTTCCCAAGGGAATCTCCCTTAGCAATTGATATGTCAACTGCCATCCTAAAACTATCAGAAAATGGTGATCTGCAAAGAATTCATGACAAATGGCTAACAAGAAGTGCATGCAGCTCAGAGGGTGCAAAACAAGGCATAGACAGACTTGAGCTAAAAAGCTTTTGGGGTCTGTTCCTACTGAGTGGCATAGCATGCTTCATTGCTCTCCTTTGCTATGTTATTAGAATGGCCTACCGTTTTAGCAGGGATTCCAATAGTAATAACATTGAATGCTCATCACTCTCTGCTCGTCTTCGATCGTTCCTTTCCTTTGTCAATGAAAGAGAAGGGGAAGACAAATGCTGGCCAAAGACAAGGAGAAAGGAGAAGTGCTCTTGTAGAAAGGTTAGGCATGACCTTAAGAGTGTGATTACCCCTCAAAATTTTGATGGTTTTGTCTACCTATTTGGAAAAGGTTTTCTGGACCACTTTGCTGCTGAATATAGATGTCAGCTACTATACTTTGAATTAAACTTCAGTGTGATTGATAATGGCTTTCCAAAGGGCATCTGCAACCATGATTGCAGTTTGGATTGTTGTGTTGATGGTTCTCTCCAAAGGATTATCTTCAATGTTGGTAGAATGGTGAAAACTGCTGTACAAGCTGCGGTTGACGATGTAAATTTTGATCAATCTATTCTTGCTAGCACTAAGTTGAAGGCCTCACTGCAAGAAGATACCAAATACAGAGGTTTTCTGAGCATTGCCGAGGCCTTGCAGCTCATGGCAACACAAACTGTGGCTATAATCGGTCCCCAGACGTCTACAACAGCTCATGTCATATCTCATATAGCGAACGAGCTCCAAGTTCCTCTACTATCATTTACAGCCACTGACCCTACTCTTTCTTCACTTCAATTCCCATTCTTTATTAGAACTGCTTTTAGTGACATTTATGAAATGACTGCAATAGCAGACTTTGTTAACTACTTTGGCTGGAGAGAGGTTATTGCTGTTTATGGTGATGATGACCATGGGAGGAATGGAATAGGTGCATTAGGGGATAAGCTTGCCGAGAGACGTTGCAAGATCTCATTTAAAGCACCTATGACTCCTGAGACAACCAGGGAGGAGATTACTGATGTGCTTGTTCAGGTGGCCTTGGCAGAATCCCGGGTTATAGTTCTTCACACAAGTACTGCTTGGGGCCCAAAAGTGTTAAGTGTGGCAAAGTCTCTGGGAATGATGGAAAACGGGTATGTCTGGATAACAACTACTTTTCTGTCTACTTGGCTGGATATAGGTAGTCCCCTATCTTCGGATGCAACAGATGACATGCAAGGAGTCATTACACTACGTATGTATATACCAGATTCAGAGCGCAAAAGATGGTTTTTTTCAAGGTGGAAAAACTTGACTACTGAAAAGACTGCTAATGGTTCCCAGGGTTTGAGTACTTATGGTATCTTTGCATATGATACTGTTTACGCTCTTGCTCATGCACTTGATGCATTTTTCAAACAAGGGAACCAAATTACATTTTCACGTGATCCAAAGTTATCTCAACTACGTGGAGACAACATGCATCTTGATGCTGTGAAAATATTCAATGAAGGAAAGCTGTTGCGTAAATATATTTATGAGGTTAACATGACTGGTGTATCAGGTCTATTCAAGTATACATCTGATGGAAACCTTGTTAATCCTGCTTATGAAATCATCAATGTTATTGGAACAGGGACTCGGAGGGTTGGTTATTGGTCTAATTACACTGGATTATCAATTGTTCCTCCTGAAGCACTTTATTCAAAACCACCTAATCGATCCAGTGCAAGCCAAAAGCTACTCCCTGTGCTTTGGCCAGGAGAAACAACCCATAGGCCCCGTGGTTGGGTTTTTCCAAACAATGGAAGGATGTTAAAAATTGGAGTGCCAAAAAGGGTTAGTTATCGAGAATTTGTCTCTCAAGTACAAGGCACTGACATGTTCAAGGGATTTTGCATTGATGTATTTCTTTCTGCTGTGAACTTGTTGCCCTATGCTGTCCCCTATAAATTTGTTTCTTATGGGGATGGTGACAGCAATCCTAGTAACACTGAGCTTGTCCGTCTTATCACAGCTGGTGTCTTCGATGCTGCAGTAGGTGACATTACAATTACTACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCATATATCGAGTCTGGTTTAGTGGTAGTTGCATCAGTTAAGAAGACAGATTCCAATGCTTGGGCTTTTTTGACGCCATTTACACCAATGATGTGGACTGTCACAGCTGTCTTTTTTCTACTAGTGGGAGCTGTTGTTTGGATTTTAGAGCATAGGCTGAATGATGATTTTAGGGGACCTCCCAAACAACAAATGGTCACAATTTTGTGTTTATCAACTTGCTCTTTTCTGTACTATGTAGGGGAAAACACAGTGAGCACTCTCGGTCGCTTTGTGCTGCTTATATGGTTATTTGTAGTTCTAATAATTAACTCAAGTTACACAGCAAGCTTGACATCAATCCTCACAGTGCAACAACTTTCTTCACCTGTTAAAGGCATTGAAAGTTTAATAAGTAGCAAAGAGCCTATTGGCTACTTGCAGGGTTCATTTACACGAACTTATTTAATTGACGAAATTGGTATTGATGAATCCAGACTAGTTCCTCTGAAAACACCAGAAGAAACTACAGAAGCACTTAAGAAAGGTCCCCAGAAGGGTGGTGTTGCTGCATACGTTGATGAGCGTGCTTACATAGAGCTCTTCCTTTCAAGCCGGTGTGATTATAGCATTGTAGGTCAAGAGTTTACCAGAAATGGTTGGGGATTTGCCTTTCCTCGAGACTCACCGTTAGCAGTTGACCTTTCGACTGCAATATTAGAGTTGGCAGAGAATGGAGACTTGCAAAGGATCCATGACAAATGGCTTTTGAGCAGTGCTTGCCTATCACAAGGTGCAAAGCTTGAAGTGGACAGACTCAACCTGAGAAGCTTTTGGGGCCTCTATCTGGTGTGTGGGTTGGCATGTGTGCTTGCTCTCCTAATATATTTTATTCAGACCATGAGGCAGTACTCCAAGCATGGCCCAGAGGAGCTCGAATCTTCTGGCCATGGCTCAGGATCTTCGCGTTTGCGCACATTCCTTACATTCGTAGATGAAAAGGAAGAGATAGTTAAGAGCCGCTCCAAGAGAAAAAAAATGGAGGGGATATCTTACAGAAGCACAAGTGAGGTTGGATCATCCATCACCTTCAACAAAGCATATTCTCAGGCATCATTAAACAGAATTGATTCAGTTAATGAAATCTAA 5667 0.4196 MEIATHPCPYDIESLKSLSELDFSYSGFPSIGTTTTDSTSPSAVNIGAILSFNSTIGKVAKVAIHAAVDDINSNATILNGTKLNITLLDTKLSTGFLGIIDSFLLMEKDTVAIIGPQYSVMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMAAVAEIVDHFQWRDVIAIFVDDDHGRNGIAALGDKLAEKRCKISYKVPFKPDNISHEEINSALVKVALMESRVIVLHIYPSSGLEVLHHAAQSLGMMGSGYVWIATDWLSTVLDSEPSLFSSSAMNDIQGVITLRMHAPDSDMKKQFVSRWKKLSQKEDSNQDPFGVNIFGLYAYDTVWLLASALDSFFKSGGTLSFSNDSSLNMLRGDSLNLDTIGVFVNGSMLLQKILEVNRTGLTGQMMFSPDGNLVHPSYEIINVIGTGIRRIGYWSETSGLHTGEGPNHSNFSEGLFGVIWPGQTTQTPRGWVFASNGRHLRIGVPLRISYREFVSKIEGTEMFGGYCIDVFTAALNLLPYPVPFKFIPFGDGKTNPLNLDLLHMITTGAFDAVVGDITITTNRTKIADFTQPYIESGLVVVAPIKKLKSSAWAFLTPFTPMMWFVTGMFFLVVGAVVWILERRINDDFRGPPRRQFVTIVCLTSQKNTFYAGEKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVISSDRIGFLRGSFAENYLTEELNIHRSRLVPLNSPSEYEKALKDGPANGGVAAIIDERAYMELFLATRCEFGIVGQEFTKMGWGFGFPRESPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLELKSFWGLFLLSGIACFIALLCYVIRMAYRFSRDSNSNNIECSSLSARLRSFLSFVNEREGEDKCWPKTRRKEKCSCRKVRHDLKSVITPQNFDGFVYLFGKGFLDHFAAEYRCQLLYFELNFSVIDNGFPKGICNHDCSLDCCVDGSLQRIIFNVGRMVKTAVQAAVDDVNFDQSILASTKLKASLQEDTKYRGFLSIAEALQLMATQTVAIIGPQTSTTAHVISHIANELQVPLLSFTATDPTLSSLQFPFFIRTAFSDIYEMTAIADFVNYFGWREVIAVYGDDDHGRNGIGALGDKLAERRCKISFKAPMTPETTREEITDVLVQVALAESRVIVLHTSTAWGPKVLSVAKSLGMMENGYVWITTTFLSTWLDIGSPLSSDATDDMQGVITLRMYIPDSERKRWFFSRWKNLTTEKTANGSQGLSTYGIFAYDTVYALAHALDAFFKQGNQITFSRDPKLSQLRGDNMHLDAVKIFNEGKLLRKYIYEVNMTGVSGLFKYTSDGNLVNPAYEIINVIGTGTRRVGYWSNYTGLSIVPPEALYSKPPNRSSASQKLLPVLWPGETTHRPRGWVFPNNGRMLKIGVPKRVSYREFVSQVQGTDMFKGFCIDVFLSAVNLLPYAVPYKFVSYGDGDSNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVASVKKTDSNAWAFLTPFTPMMWTVTAVFFLLVGAVVWILEHRLNDDFRGPPKQQMVTILCLSTCSFLYYVGENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPVKGIESLISSKEPIGYLQGSFTRTYLIDEIGIDESRLVPLKTPEETTEALKKGPQKGGVAAYVDERAYIELFLSSRCDYSIVGQEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLSSACLSQGAKLEVDRLNLRSFWGLYLVCGLACVLALLIYFIQTMRQYSKHGPEELESSGHGSGSSRLRTFLTFVDEKEEIVKSRSKRKKMEGISYRSTSEVGSSITFNKAYSQASLNRIDSVNEI 1888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01830 1888 Gene3D - 1098 1375 - -
Gma09g01830 1888 SUPERFAMILY Periplasmic binding protein-like II 1397 1764 - -
Gma09g01830 1888 Pfam Ligand-gated ion channel 823 854 IPR001320 GO:0015276|GO:0016020
Gma09g01830 1888 Gene3D - 62 416 - -
Gma09g01830 1888 CDD PBP1_GABAb_receptor_plant 994 1379 IPR044440 -
Gma09g01830 1888 Gene3D - 472 591 - -
Gma09g01830 1888 Gene3D - 1655 1765 - -
Gma09g01830 1888 PANTHER GLUTAMATE RECEPTOR 987 1880 - -
Gma09g01830 1888 CDD GluR_Plant 481 821 - -
Gma09g01830 1888 Gene3D - 750 828 - -
Gma09g01830 1888 CDD GluR_Plant 1420 1762 - -
Gma09g01830 1888 Pfam Bacterial extracellular solute-binding proteins, family 3 1479 1762 IPR001638 -
Gma09g01830 1888 Gene3D - 1000 1350 - -
Gma09g01830 1888 Pfam Ligand-gated ion channel 1763 1795 IPR001320 GO:0015276|GO:0016020
Gma09g01830 1888 SUPERFAMILY Periplasmic binding protein-like II 456 823 - -
Gma09g01830 1888 Gene3D - 1421 1532 - -
Gma09g01830 1888 Pfam Receptor family ligand binding region 62 426 IPR001828 -
Gma09g01830 1888 Pfam Receptor family ligand binding region 998 1360 IPR001828 -
Gma09g01830 1888 Gene3D - 160 441 - -
Gma09g01830 1888 PANTHER GLUTAMATE RECEPTOR 20 926 - -
Gma09g01830 1888 Gene3D - 592 724 - -
Gma09g01830 1888 Gene3D - 1533 1654 - -
Gma09g01830 1888 SUPERFAMILY Periplasmic binding protein-like I 994 1414 IPR028082 -
Gma09g01830 1888 CDD PBP1_GABAb_receptor_plant 45 441 IPR044440 -
Gma09g01830 1888 Pfam Bacterial extracellular solute-binding proteins, family 3 542 822 IPR001638 -
Gma09g01830 1888 SMART GluR_14 482 823 IPR001320 GO:0015276|GO:0016020
Gma09g01830 1888 SMART GluR_14 1423 1764 IPR001320 GO:0015276|GO:0016020
Gma09g01830 1888 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 20 926 - -
Gma09g01830 1888 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 987 1880 - -
Gma09g01830 1888 SUPERFAMILY Periplasmic binding protein-like I 40 472 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01830 Gma-Chr9 43913356 43927911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01830 26 910 Ion Channels AT3G51480 56.278 0.0 1020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01830 K05387 - gmx:100789442 1748.41