Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01804 ATGGCAGGTGGAGGATTTTCTGATGCTGGAACACTCAAGAGGGCTCATCTTTACCAGTACAAGATTACTGGATATTTCATCTTTTCTTGCATTGTTGGAGCTCTTGGTGGCGCTCTATTTGGCTATGATCTTGGTGTTTCAGGTGGAGTTACCTCCATGGATGATTTCCTCATACAATTCTTCCCAAAGGTGTATGAAAAGAAGCATGCACATCTTGCGGAGACAGATTATTGTAAATATGATGATCAGATATTGACACTCTTTACTTCATCTCTATACTTTGCTGCCCTTGTGTCCACGTTTGGTGCTTCCAGTGTAACAAAAACCAAAGGCAGAAAAGCTAGCATCTTAGCTGGTTCCGTAAGCTTCTTTATAGGAGCTATTCTGAATGCAGCTGCCAAGAGCATTACAATGTTGATCCTTGGGCGTATCCTTCTTGGTGTTGGCATTGGATTTGGTAACCAAGCTGTTCCTCTCTATCTTTCAGAAATGGCACCTGCAAAAGTGAGAGGAGCAGTGAACCAACTCTTTCAGTTAACAACATGCTTGGGAATTCTGATTGCCAACCTTGTGAATTATGGCACCGAGAAGATTCATCCTTGGGGGTGGAGGTTATCCCTTGGTTTAGCTACAGTTCCAGCAGTTTTTATGTTCATTGGAGGCTGTTTGTGTCCTGAAACACCCAACAGCCTTGTGGAACAAGGCAGATTCGACGAAGGACGAGCGGTGTTGGAGAAGGTTAGGGGCACTCCAAATGTTGATGCTGAATTTGATGATCTTATTGAGGCAAGCAGAGAAGCAAAATCCATCAAGAATCCATTCCAGAACCTTCTTTTGAGGAAAAACAGACCACAGGTGATAATTGGTGCCTTTGCTATTCCAGCATTCCAACAGTTAACTGGCAACAACTCCATCCTCTTCTATGCTCCTGTTATCTTCCAAACTTTGGGATTTGGATCTGGGGCATCTCTGTATTCATCGGTTATTACAAGTGTAGCACTTGTTGTTGCCACACTCATCTCAATGGCTTTTGTAGACAAGTTTGGCAGGAGAGCTTTCTTTTTGGAAGCCGGTGCTGAAATGATAATCTGCTTGGTTGCTATGGCTATAGTTTTGTCTGTTGAATTTGGAAAAGGCAAAGAACTGTCATATGGTGTTAGTATATTTTTGGTTATAGTGATTTTCCTATTCGTCTTGGCATATGGAAGATCTTGGGGTCCCTTGGGATGGTTGGTTCCTAGTGAGCTCTTCCCACTAGAGATAAGGTCAGCAGCACAAAGTGTTGTGGTGTGTGTCAACATGATCTTCACTGCTCTTGTGGCACAATTCTTCCTTGTATCACTTTGCCACCTCAAATATGGAATCTTCTTGCTGTTTGCAGCCTTAATTGTCCTTATGAGCTGCTTTGTTTTCTTCCTCTTGCCAGAAACCAAGCAAGTCCCAATTGAGGAGATTTATCTTCTGTTTGAGAATCATTGGTTTTGGAAGAGAGTAGTAGGAGAAGGGAAAAACACATCTGGGTCATCATCAAATGCTAACGTTGAGAAAAGTATGTCTGAATTGAAGGGAGATGACCATCTTATAAAGAATCTTCGACGAGTAGCAAGAAATGTGAATAAGATTGTTGCTGAAGGACAAATATCCAGAGCACCTTCTAGTTATCCTTCTTTGGTTTGTAGGGACCTCAGCAATGGTCTAGAAGCTATACCCATTCCAGTTACTAATGAGATTGATGATTCTCCTATCACACCTAACGGCTTTACATATATCACATCTAGCCAAGTTGCAAACAACGTGAAAGTTCCATCTAGTGATGACTATGGTTGTCAATGCAAAGGAAATAGTTGTAGAACTAACAAGAATTGTTGTTTTAGACTTAATAACATGTATCCATATGTTCGTCGTCGGAAATGTAGCAGATTGATCCAAGCTAGAGATATTGTGTTTGAATGTGGTCCAAGATGTGGATGTGGTCCTGATTGTGGCAGTAGAGTATCTCAGAAGGGTTTGCAGTACCAGCTTGAGgtttatcgtacgtctgacaaaggatgggctgTTAGAACTAGGAATTTTATTCCTGTTGGAGCTTTAGTTTGTGAACTTGTTGGGGTACTAAAGAGAACTGAAGACTTGGATAATGATTCACACAATGACTACATAGTTGAAATTGATGGCTGGGAAACTATAAAAGAGATAGGTGGACGAAAGAAACGATTGCCTGACGAGCCATTGCCTGCAAAAATTTTCCTTGAAAATAAGGATGATGAGACAACCAAAAATGATCCAGAGTTCTGTATAGATTGTAGTTCTTTTGGTAATGTGGCTAGGTTCATCAACCATAGTTGTGATCCTAACCTATTTGTTCAATGTGTTTTGAACTCCCATTATGGGATCAAACAAGCTCGAATTGTACTATTTGCTGGAAGAAACATACGTCCTAAACAGGAACTTACTTATGACTATGGTTACCGACTTGATAGTGTTGCTGATGTCGATGGAAAAATCAAGCAATTACCATGTTACTGTGGTGAAGCTACTTGTCGCAAGCGTTTATACTAG 2559 0.4048 MAGGGFSDAGTLKRAHLYQYKITGYFIFSCIVGALGGALFGYDLGVSGGVTSMDDFLIQFFPKVYEKKHAHLAETDYCKYDDQILTLFTSSLYFAALVSTFGASSVTKTKGRKASILAGSVSFFIGAILNAAAKSITMLILGRILLGVGIGFGNQAVPLYLSEMAPAKVRGAVNQLFQLTTCLGILIANLVNYGTEKIHPWGWRLSLGLATVPAVFMFIGGCLCPETPNSLVEQGRFDEGRAVLEKVRGTPNVDAEFDDLIEASREAKSIKNPFQNLLLRKNRPQVIIGAFAIPAFQQLTGNNSILFYAPVIFQTLGFGSGASLYSSVITSVALVVATLISMAFVDKFGRRAFFLEAGAEMIICLVAMAIVLSVEFGKGKELSYGVSIFLVIVIFLFVLAYGRSWGPLGWLVPSELFPLEIRSAAQSVVVCVNMIFTALVAQFFLVSLCHLKYGIFLLFAALIVLMSCFVFFLLPETKQVPIEEIYLLFENHWFWKRVVGEGKNTSGSSSNANVEKSMSELKGDDHLIKNLRRVARNVNKIVAEGQISRAPSSYPSLVCRDLSNGLEAIPIPVTNEIDDSPITPNGFTYITSSQVANNVKVPSSDDYGCQCKGNSCRTNKNCCFRLNNMYPYVRRRKCSRLIQARDIVFECGPRCGCGPDCGSRVSQKGLQYQLEVYRTSDKGWAVRTRNFIPVGALVCELVGVLKRTEDLDNDSHNDYIVEIDGWETIKEIGGRKKRLPDEPLPAKIFLENKDDETTKNDPEFCIDCSSFGNVARFINHSCDPNLFVQCVLNSHYGIKQARIVLFAGRNIRPKQELTYDYGYRLDSVADVDGKIKQLPCYCGEATCRKRLY 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01804 852 Pfam Sugar (and other) transporter 30 486 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma09g01804 852 ProSiteProfiles Pre-SET domain profile. 607 669 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma09g01804 852 Pfam SET domain 683 822 IPR001214 GO:0005515
Gma09g01804 852 ProSitePatterns Sugar transport proteins signature 1. 341 358 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma09g01804 852 SUPERFAMILY SET domain 556 828 IPR046341 -
Gma09g01804 852 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 1 503 IPR045262 GO:0015144
Gma09g01804 852 ProSitePatterns Sugar transport proteins signature 2. 145 170 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma09g01804 852 Gene3D MFS general substrate transporter like domains 18 492 IPR036259 -
Gma09g01804 852 PANTHER SUGAR TRANSPORT PROTEIN 14-LIKE 1 503 - -
Gma09g01804 852 Gene3D SET domain 553 852 IPR046341 -
Gma09g01804 852 TIGRFAM SP: MFS transporter, sugar porter (SP) family 23 485 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma09g01804 852 SMART set_7 672 828 IPR001214 GO:0005515
Gma09g01804 852 SUPERFAMILY MFS general substrate transporter 25 484 IPR036259 -
Gma09g01804 852 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 478 IPR020846 GO:0022857
Gma09g01804 852 SMART PostSET_3 836 852 IPR003616 -
Gma09g01804 852 PRINTS Sugar transporter signature 140 159 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma09g01804 852 PRINTS Sugar transporter signature 297 307 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma09g01804 852 PRINTS Sugar transporter signature 391 412 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma09g01804 852 PRINTS Sugar transporter signature 414 426 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma09g01804 852 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma09g01804 852 ProSiteProfiles SET domain profile. 672 822 IPR001214 GO:0005515
Gma09g01804 852 SMART preset_2 559 656 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma09g01804 852 CDD MFS_STP 32 476 IPR044778 GO:0015145|GO:0015749
Gma09g01804 852 Pfam Pre-SET motif 563 664 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma09g01804 852 ProSiteProfiles Post-SET domain profile. 836 852 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01804 Gma-Chr9 43617186 43627646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01804 1 514 Organic Solute Cotransporters AT4G02050 58.333 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma09g01804 Sugar_tr 4.5e-117 CL0015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01804 K24193 - gmx:100783066 1670.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01804 09 43617186 43627646 Gma09g01804 09 43617186 43627646 ECH
Gma09g01804 09 43617186 43627646 Gma05g02221 05 43280730 43285187 PCT
Gma09g01804 09 43617186 43627646 Gma08g00340 08 2860948 2863955 PCT