Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01803 ATGACAGAGAACTCATCATCAAATTCAGGGAAGGGAAAGAACATTATTGATGAACAACAACATGAAGAAAGTGGAAAAAGTGAAGAAGGCAACAACAACAGATTGGTAAACGAAATCCTATCTTACAACGAGTCGCAGCTGAAGTTCCTGCTCAACGTTGGCATCGTGAAAGATTGCGAGCTGAGCATGCCGTATATCACTCAACTGACCAGCGACAAGTGGAACCTGTTCTTGCGCACGCCTCAGTTTGAAGGTATCTTCTTAGGGTTCTTGAAAGAAGGTGAGGATGTTAGAGACGGAATTCCAGTGAACGTGTATGACAAACATGGCCATGAGTTCGAGATGATGCTCAAGAAATTTCACAAAGGTTCCATCAGTTACTATGTGCTAAACCGAGGGTGGCTCAGTTTCTGCAACCAACAGCACTTGGGAGAGAACGATATCATTGCCTTGCGCACGTTTCGCCATGCAATAACTGACAAGTTGTCTTTCGTTGTTACTTACGTGAGAGTGGCGTGGTAA 522 0.4425 MTENSSSNSGKGKNIIDEQQHEESGKSEEGNNNRLVNEILSYNESQLKFLLNVGIVKDCELSMPYITQLTSDKWNLFLRTPQFEGIFLGFLKEGEDVRDGIPVNVYDKHGHEFEMMLKKFHKGSISYYVLNRGWLSFCNQQHLGENDIIALRTFRHAITDKLSFVVTYVRVAW 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01803 173 ProSiteProfiles B3 DNA-binding domain profile. 103 172 IPR003340 GO:0003677
Gma09g01803 173 MobiDBLite consensus disorder prediction 15 29 - -
Gma09g01803 173 MobiDBLite consensus disorder prediction 1 31 - -
Gma09g01803 173 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 13 171 IPR005508 GO:0003677
Gma09g01803 173 CDD B3_DNA 90 170 IPR003340 GO:0003677
Gma09g01803 173 SUPERFAMILY DNA-binding pseudobarrel domain 95 159 IPR015300 -
Gma09g01803 173 PANTHER B3 DOMAIN PLANT PROTEIN 13 171 - -
Gma09g01803 173 Pfam B3 DNA binding domain 98 153 IPR003340 GO:0003677
Gma09g01803 173 Gene3D - 67 172 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01803 Gma-Chr9 43612212 43612733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01803 61 172 B3 DNA Binding Superfamily AT4G03170 31.356 3.11e-07 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma09g01803 B3 1.6e-08 CL0405