Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01801 ATGGGTTGCATTTACTCGCGAGTCTGCATAGGCGACAATTGCAGAGGCTCAAGCATCAACGGAGACCCCATTATCGCCCGAAACGACGTCGCCGAAGTCGCGAATTTCTCCCCTTCCTCTTCGGATGTTGAAGAAGGCGAAATCAGAGACCAATTGAACCAATTGAGCATCACTCGAGACTCCGAAGCTGGAATCCGGAGACTTGCTAGGGTTTCCGCGCAGTTTCTTCCACCCGACGGTTCCCGAATCGTTAAGATTCCTTCCGGAAACTTCGAATTGCGATACTCGTTCTTGTCGCAACGAGGTTACTACCCCGATGCACTCGATAAAGCTAACCAAGACAGTTTCTGCATCCACACACCTTTTGGTACGAGCCCTAACGACCACTTCTTCGGTGTCTTCGACGGCCATGGCGAGTTCGGAGCTCAGTGTTCTCAGTTCGTGAAGAGGAAACTGTGTGAGAATTTGCTCAGGAACTCCAAATTCCGCGCCGATCCTGTTGAGGCTTGTCACGCGGCGTTTTTAGCGACGAATTCGCAGCTGCACAATGATGTTGTTCTGGATGACAGCATGAGCGGGACGACGGCGATCACGGTGCTGGTGAGAGGGAGGACGATATACGTGGCGAATTCCGGCGATTCAAGGGCGGTGATCGCGGAAAGGAGAGGGAAGGAGGAAGAAGTTGTGGCCGTTGATTTGTCGATTGATCAGACGCCTTTCAGGAGTGATGAGCTTGAGAGGGTGAAAATGTGTGGGGCGAGGGTTCTTACTTTGGATCAGATTGAGGGGTTGAAGAACCCTGATGTGCAGTGTTGGGGCACTGAGGAAGGTGATGATGGTGACCCTCCGAGGTTGTGGGTGCCCAATGGGATGTATCCGGGGACGGCGTTTACGCGGAGCATTGGTGATTCCATTGCTGAGACTATTGGGGTTGTGGCCAATCCTGAGATTGTTGTGTTTGAGCTCACGCAGGATCACCCTTTCTTTGTGCTGGCCAGTGATGGGGTCTTTGAGTTTCTCTCTAGCCAGACTGTGGTTGAAATGGTTGCAAAATTTAAAGATCCTCGTGATGCTTGTGCTGCAATTGTGGCAGAATCTTATCGGCTCTGGCTGCAGTATGAAACTCGTACAGATGACATTACAGTCATCATTGTGCATGTAAATGGGCTAACTGAATCTGCTGTTGGTCAGTCAGCAAGTTATGGTGATGTTTTGCGAAACCCTGTGCCTCAAGTTGTAGAGGTGACAGGTTCAGAATCCCCTTCCACCTTTGGCTGGAGCGCTAGAAACCATCGCGTAAGGCATGAATTGTCAAGGGCACGCCTCCGAGCACTTGAAAATTCCCTAGAAAATGGTCAAACCTGGGTTCCTCCATCCTCAGCCCATAGAAAGACATGGGAAGAAGAAGCACACATAGAGCAGGCGTTGCATGATCATTTTCTCTTCCGAAAACTTACTGATTCTCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTGGAAGTCCAACCTGGGGATATTATAGTCAAACAGGGTGGTGAAGGTGATTGTTTTTATGTTGTTGGTAGTGGAGAATTTGAGGTCTCGGCGACTCAGGAAGAAAAAGATGGGGAGGCACCTAGGGTTTTGCAGCACTACACAGCTGAAAAACTTTCATGCTTTGGAGAACTTGCTCTAATGTACAATAAACCCCTCCAGGCTTCTGTATGTGCTGTTACAAAAGGAACTCTTTGGTCTTTAAAACGAGAAGATTTTCGAGGGATTTTAATGTCAGAATTCTCTAACTTGTCATCATTGAAGTTGCTTCGGTCTGTAGATCTCCTCTCAAGGTTGTCAATTTTACAACTCAGTCAGATTTCTGACTCCCTTTCTGAAGTTTCCTTCTCAAATGGGCAGACAATAATAGACAAAAATGAAGTCCTTGCATTGTACATTATCCAAAAGGGACGAGTGAAAATCACTTTGGATTCTGATTTATTGTCTTGTCCAAATGCCTACAGCCTCAAGCCTGACATCCAAAGTGAGGATGATGTACAGAGCGGAAAAGAACTGTCAATAGAGAAGCCTGAGGGAAGCTATTTTGGTGAATGGGCCCTTCTTGGTGAAAATATTGGTTCCTTGAGTGCTGTTGCTGTGGGTGATGTTGTATGTGCTTTACTAACAAAGGAAAAATTTGAATCTGTTATTGGCTCCTTACAAAAGATTTCTCAGGAAGATCACAAGTCAAGGGATTATTCTAGAAATTATGAATTTTCATCCCTCGATAAGGTCCAGCTCTCAGATTTGGAGTGGAGAAAGACACTATATTCCACTGACTGCTCTGAAATAGGGCTTGCAAATTTTAGAGATTCAGCAGAAAATTTGCTTACTTTGAAGAGATTTTCTAAGCCAAAGGTGAAAAAGCTAGGAAAGGAATCACAAGTCTTTAAAGAGAGAGATTTGATTATGGGTATGGGCTCTTTAGCCTGTACACCACAGGTTTTATGCACTTGTGCTGATCTTATGTATGCTGGAATACTTTTAAATACTCGCCTTGCTTGCCCTTTGTCTTCCATACTTTCAAGTCCTTTTAGTGAATCAGCAGCGCAGTTTTGTGCGGCTTCTGTTGTTACTGCCTTAGAAGACTTGCACAAGAATGGGGTTCTCTACAGAGGTGTGTCACCTGATGTTTTGATGTTGGAACAGACAGGACATATACAGCTGGTGGACTTCAGATTTGGAAAACAGCTTTCAGGTGAGAGAACATTCACAATTTGTGGGATGGCAGATTCACTGGCTCCAGAGATTGTTTTGGGAAAAGGCCACGGTTTCCCTGCTGACTGGTGGGCGTTGGGAGTTTTAATATATTTTATGTTACGTGGTGAGATGCCATTTGGATCATGGAGAGAAAATGAACTTGATACAGTTGCCAAAATTGCAAAAAGGAAGCTACATCTTCCCGAGACTTTTAGCCCTGAAGCTGTTGATCTCATCTCCAAGCTACTTGAAGTGGAAGAAAACACTAGACTTGGTAGCCAAGGTCCTGATTCTGTCAAGAATCACCCATGGTTTAATGGTGTTGAATGGGAAGGGATTAGAAACCACACCTTTCCCGTTCCACAGGAAATTATTTCTCGTATAACACAGCACTTGGAAGTTCATTCTGAGGATTGTAGTACTGGTTATCTGGGTTCCCCATTACAGGAGGTAAAAGAACTTAATGTGCCTGAATGGCTTGAGGACTGGTAG 3228 0.4548 MGCIYSRVCIGDNCRGSSINGDPIIARNDVAEVANFSPSSSDVEEGEIRDQLNQLSITRDSEAGIRRLARVSAQFLPPDGSRIVKIPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSPNDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNSKFRADPVEACHAAFLATNSQLHNDVVLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERRGKEEEVVAVDLSIDQTPFRSDELERVKMCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVFELTQDHPFFVLASDGVFEFLSSQTVVEMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITVIIVHVNGLTESAVGQSASYGDVLRNPVPQVVEVTGSESPSTFGWSARNHRVRHELSRARLRALENSLENGQTWVPPSSAHRKTWEEEAHIEQALHDHFLFRKLTDSQCHVLLDCMQRVEVQPGDIIVKQGGEGDCFYVVGSGEFEVSATQEEKDGEAPRVLQHYTAEKLSCFGELALMYNKPLQASVCAVTKGTLWSLKREDFRGILMSEFSNLSSLKLLRSVDLLSRLSILQLSQISDSLSEVSFSNGQTIIDKNEVLALYIIQKGRVKITLDSDLLSCPNAYSLKPDIQSEDDVQSGKELSIEKPEGSYFGEWALLGENIGSLSAVAVGDVVCALLTKEKFESVIGSLQKISQEDHKSRDYSRNYEFSSLDKVQLSDLEWRKTLYSTDCSEIGLANFRDSAENLLTLKRFSKPKVKKLGKESQVFKERDLIMGMGSLACTPQVLCTCADLMYAGILLNTRLACPLSSILSSPFSESAAQFCAASVVTALEDLHKNGVLYRGVSPDVLMLEQTGHIQLVDFRFGKQLSGERTFTICGMADSLAPEIVLGKGHGFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLHLPETFSPEAVDLISKLLEVEENTRLGSQGPDSVKNHPWFNGVEWEGIRNHTFPVPQEIISRITQHLEVHSEDCSTGYLGSPLQEVKELNVPEWLEDW 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01801 1075 Pfam Protein kinase domain 848 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01801 1075 Gene3D Jelly Rolls 594 747 IPR014710 -
Gma09g01801 1075 PRINTS cAMP-dependent protein kinase signature 502 516 - -
Gma09g01801 1075 PRINTS cAMP-dependent protein kinase signature 517 531 - -
Gma09g01801 1075 PRINTS cAMP-dependent protein kinase signature 552 561 - -
Gma09g01801 1075 PRINTS cAMP-dependent protein kinase signature 725 737 - -
Gma09g01801 1075 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 37 1075 - -
Gma09g01801 1075 Gene3D Phosphorylase Kinase; domain 1 760 847 - -
Gma09g01801 1075 SUPERFAMILY Protein kinase-like (PK-like) 755 1045 IPR011009 -
Gma09g01801 1075 Pfam Protein phosphatase 2C 124 366 IPR001932 -
Gma09g01801 1075 Gene3D Transferase(Phosphotransferase) domain 1 848 1033 - -
Gma09g01801 1075 SUPERFAMILY cAMP-binding domain-like 598 736 IPR018490 -
Gma09g01801 1075 ProSiteProfiles cAMP/cGMP binding motif profile. 607 730 IPR000595 -
Gma09g01801 1075 Gene3D - 90 388 IPR036457 -
Gma09g01801 1075 SUPERFAMILY PP2C-like 82 389 IPR036457 -
Gma09g01801 1075 SMART cnmp_10 481 605 IPR000595 -
Gma09g01801 1075 SMART cnmp_10 607 744 IPR000595 -
Gma09g01801 1075 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 37 1075 - -
Gma09g01801 1075 ProSiteProfiles cAMP/cGMP binding motif profile. 481 590 IPR000595 -
Gma09g01801 1075 SMART serkin_6 770 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01801 1075 CDD PP2Cc 110 387 IPR001932 -
Gma09g01801 1075 Gene3D Jelly Rolls 447 589 IPR014710 -
Gma09g01801 1075 SUPERFAMILY cAMP-binding domain-like 462 591 IPR018490 -
Gma09g01801 1075 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Gma09g01801 1075 ProSiteProfiles PPM-type phosphatase domain profile. 94 387 IPR001932 -
Gma09g01801 1075 Pfam Cyclic nucleotide-binding domain 626 729 IPR000595 -
Gma09g01801 1075 Pfam Cyclic nucleotide-binding domain 500 591 IPR000595 -
Gma09g01801 1075 ProSiteProfiles Protein kinase domain profile. 762 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01801 1075 CDD CAP_ED 607 730 IPR000595 -
Gma09g01801 1075 CDD CAP_ED 481 590 IPR000595 -
Gma09g01801 1075 SMART PP2C_4 90 385 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01801 Gma-Chr9 43595736 43605122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01801 1 1075 PP2C-type Phosphatase Gene Family AT2G20050 67.265 0.0 1483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Gma09g01801 PP2C 3.6e-35 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01801 - - gmx:100781992 2119.74