Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01798 ATGGCTTCTTCAATTCGTCCCTCACTTTCTTCCTTCATGTTACCCTCCCTCCGCTCTTGCAACCCTTCTGAAAAGCTCTCTCTTTTTCATCTCGGTAGCGGTATTAGACTGTATCATAAGTTTGGCCTGAAATCTTCTAGGCTTTTAAGACATGATGATAATAAGTGCATGAGAGTGATGGCATCTGGGAACATGTCCACAGCTGCTACACAGGAAAATGTGCTCGATTGGGTCAAACATGACAAGAGAAGAATGCTTCATGTTGTGTATCGTGTTGGGGACTTGGACAAGAGCATAAAATTTTATAGAGAGTGCCTTGGAATGAAGTTGCTCAGAAAGCGCGACATGCAAGAACAGAGATATACTAATGCCTTTCTTGGATATGGCCCTGAGGATGCACACTTTGTTGCTGAACTGACATACAATTATGGGATTGATAAGTATGACATTGGAGATGGATTTGGCCATTTTGGTCTTGCTGTTGATGATATTTCAAGAATAGTGGAACTTGTTAGAGCCAAGGGAGGGAAAATTACTAGAGAGCCTAGTCCTGTCAAGGGAGGCAACTCAACAATTGCATATATTGAAGATCCTGATGGTTATCAATTTGAACTTTCCGAAAGGGTTTCCTCTCCTGAGCCTTTGAGCAAAGTAATGCTTCGAGTGGGTGATCTTGATCGTTCCATTAAATTTTATGAGAAGGCTTTTGGTATGGAGCTACTTCGAACACAAGATGATCCAGAGTCTAAGAGTACAATAGCAATACTGGGTTATGGTCCAGAGGAAAAAAACACTGTCCTGGAATTGACTTACAACTATGGAGTCACAGATTATGATAAAGGAGATGCTTATGCTCAGATTACAATAGGCACAGATGATGTGTACAAAACTGCAGAAGCAATCAAACTTGCAGGAGGGAAGATTACTCGGGAACCTGGACCTGTACCTGGTATCAAAACGAAGATCACATTGTGTGTTGATCCTGATGGTTGGAAAACTGTTTTTGTAGATAATGTTGACTTTCGTAGGGAGTTGGAATAG 1041 0.414 MASSIRPSLSSFMLPSLRSCNPSEKLSLFHLGSGIRLYHKFGLKSSRLLRHDDNKCMRVMASGNMSTAATQENVLDWVKHDKRRMLHVVYRVGDLDKSIKFYRECLGMKLLRKRDMQEQRYTNAFLGYGPEDAHFVAELTYNYGIDKYDIGDGFGHFGLAVDDISRIVELVRAKGGKITREPSPVKGGNSTIAYIEDPDGYQFELSERVSSPEPLSKVMLRVGDLDRSIKFYEKAFGMELLRTQDDPESKSTIAILGYGPEEKNTVLELTYNYGVTDYDKGDAYAQITIGTDDVYKTAEAIKLAGGKITREPGPVPGIKTKITLCVDPDGWKTVFVDNVDFRRELE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01798 346 CDD GlxI_Ni 85 205 - -
Gma09g01798 346 TIGRFAM glyox_I: lactoylglutathione lyase 72 215 IPR004361 GO:0004462|GO:0046872
Gma09g01798 346 TIGRFAM glyox_I: lactoylglutathione lyase 215 341 IPR004361 GO:0004462|GO:0046872
Gma09g01798 346 ProSitePatterns Glyoxalase I signature 1. 87 108 IPR018146 GO:0004462|GO:0046872
Gma09g01798 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 214 338 IPR037523 -
Gma09g01798 346 PANTHER LACTOYLGLUTATHIONE LYASE 11 346 - -
Gma09g01798 346 Gene3D - 211 346 IPR029068 -
Gma09g01798 346 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 11 346 - -
Gma09g01798 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 84 208 IPR037523 -
Gma09g01798 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 84 209 IPR029068 -
Gma09g01798 346 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 85 205 IPR004360 -
Gma09g01798 346 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 217 332 IPR004360 -
Gma09g01798 346 Gene3D - 55 210 IPR029068 -
Gma09g01798 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 217 338 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01798 Gma-Chr9 43574858 43578158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01798 215 335 Calmodulin-binding Proteins AT1G08110 26.531 1.93e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01798 K01759 - gmx:100781439 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01798 09 43574858 43578158 Gma09g01798 09 43574858 43578158 ECH
Gma05g02222 05 43288495 43293726 Gma09g01798 09 43574858 43578158 PCT
Gma08g00341 08 2874196 2880530 Gma09g01798 09 43574858 43578158 PCT
Gma09g01798 09 43574858 43578158 Gma05g02222 05 43288495 43293726 PCT
Gma09g01798 09 43574858 43578158 Gma08g00341 08 2874196 2880530 PCT