Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01772 ATGTCAACTGCCCCCGCGCCGTCTTCGCCGCCGGCGAATAACGGCACCGCGCCTCCTCCGTCAActccggccactccctccgcaccgcctcccgccacaccttccgcgccgccACCCTcaactccgtcgtctcctccgccggcaactccgtcgtctcctccgccggTGACACCTTCCTCGCCACCTCCGGCAACCCCTTCCTCTCCCCCTCCGGCGactccctcttctcctccaccgtccactccttctgcttctcctccaccgtccactccAACCAcgccatcgacttctccgccgtcgccgccgtcgacatcgccaccgtcgccACCCAGTGGCGGCAGCACTCCGAGTCCACCGTCTCGGAGCTCGCCCTCTCCTCCGTCCGGATCGAGCCCGACCACTCCGTCGCCTCCGTCGTCTTCCTCGTCGAGCATTTCGACCGGCGTGGTGGTCGGAATCGCCGTTGGGGCTGTGGCGGTTCTTCTTGTGTTGAGCATTCTCTGCATATGCTGTCGGAAGAAGAAGAGAAGACGTGATGAAGAGTACCATGCTCCGCCGCCGCAGCAGCAGCAACCGCCGCGGGGACCTAAAGATGGTGCATATGGTGGTCCCCCAGGCCAATGGCAACACAATGTTCCTCCTCCTCAAGATCATGTGGTCTCAATGATGCCTCCAAAGCCATCGCCACCGCCTGCTCCACCAGCTTATGCTGGTCAACCTCCCCCACCACCGCCTCCTTTCATCAGCAGCAGTGGCGGATCTGGATCAAACAATTCAGGCGGTGAATTTCTTCCTCCTCCTTCTCCAGGAATTTCATTGGGGTTCTCTAAGAGCACATTCACGTATGAGGAGTTGGCACGCGCAACTGATGGCTTCTCTGATGCCAACCTCCTTGGACAAGGAGGATTTGGATATGTGCACAGAGGAATTCTTCCCAACGGCAAGGAGGTGGCAGTGAAGCAATTGAAGGCTGGAAGCGGGCAAGGGGAGCGTGAATTCCAAGCTGAAGTTGAGATAATTAGCCGTGTCCATCACAAGCATCTTGTTTCTTTGGTTGGATACTGCATCACTGGGTCCCAGAGGCTGCTTGTTTATGAATTTGTTCCCAACAACACATTGGAATTCCATTTGCATGGAAAAGGGAGACCTACCATGGATTGGCCCACAAGACTAAGAATTGCTTTAGGATCTGCTAAGGGACTGGCGTATCTTCATGAAGATTGTCATCCTAAGATCATCCATCGTGATATCAAATCTGCCAACATCCTTCTGGATTTTAAGTTTGAAGCAAAGGTTGCAGATTTTGGTCTTGCAAAGTTTTCTTCTGATGTCAATACCCATGTTTCTACTCGAGTGATGGGGACTTTTGGGTATTTGGCTCCAGAATATGCTTCTAGTGGAAAACTCACAGACAAATCAGATGTTTTCTCCTATGGAATCATGCTCCTTGAGTTAATAACCGGACGACGGCCAGTTGATAAAAATCAAACTTACATGGAGGATAGTTTGGTAGATTGGGCTAGGCCTTTGCTCACACGAGCTTTGGAAGAGGATGATTTTGATTCTATTATTGACCCAAGGCTCCAGAATGACTATGATCCTCATGAGATGGCACGAATGGTGGCTTCTGCTGCGGCTTGCATACGTCATTCGGCAAAGCGTCGACCAAGGATGAGCCAGGTTGTCCGCGCTCTCGAAGGAGATGTCTCTCTAGCAGATCTGAATGAAGGAATAAGACCTGGACACAGCACTATGTATAGTTCTCATGAAAGCTCAGATTATGACACTGCACAGTACAAGGAAGACATGAAAAAGTTCAGGAAAATGGCATTGGGAACTCAGGAGTATGGTGCAAGCAGTGAGTACAGTGCCGCTACAAGTGAGTATGGTTTAAACCCATCAGGCTCAAGTAGTGAAGCACAGAGCCGCCAAACCACAAGGGAAATGGAAATGAGAAAGATGAAGAACAATCAAGGTTTCAGTGGAAGTTCTTGA 1995 0.4531 MSTAPAPSSPPANNGTAPPPSTPATPSAPPPATPSAPPPSTPSSPPPATPSSPPPVTPSSPPPATPSSPPPATPSSPPPSTPSASPPPSTPTTPSTSPPSPPSTSPPSPPSGGSTPSPPSRSSPSPPSGSSPTTPSPPSSSSSSISTGVVVGIAVGAVAVLLVLSILCICCRKKKRRRDEEYHAPPPQQQQPPRGPKDGAYGGPPGQWQHNVPPPQDHVVSMMPPKPSPPPAPPAYAGQPPPPPPPFISSSGGSGSNNSGGEFLPPPSPGISLGFSKSTFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLRIALGSAKGLAYLHEDCHPKIIHRDIKSANILLDFKFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSYGIMLLELITGRRPVDKNQTYMEDSLVDWARPLLTRALEEDDFDSIIDPRLQNDYDPHEMARMVASAAACIRHSAKRRPRMSQVVRALEGDVSLADLNEGIRPGHSTMYSSHESSDYDTAQYKEDMKKFRKMALGTQEYGASSEYSAATSEYGLNPSGSSSEAQSRQTTREMEMRKMKNNQGFSGSS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01772 664 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Gma09g01772 664 Gene3D Phosphorylase Kinase; domain 1 272 367 - -
Gma09g01772 664 Gene3D Transferase(Phosphotransferase) domain 1 368 575 - -
Gma09g01772 664 CDD STKc_IRAK 298 567 - -
Gma09g01772 664 MobiDBLite consensus disorder prediction 617 664 - -
Gma09g01772 664 MobiDBLite consensus disorder prediction 617 644 - -
Gma09g01772 664 ProSiteProfiles Protein kinase domain profile. 292 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01772 664 PRINTS Proline rich extensin signature 23 39 - -
Gma09g01772 664 PRINTS Proline rich extensin signature 43 55 - -
Gma09g01772 664 PRINTS Proline rich extensin signature 58 79 - -
Gma09g01772 664 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 29 648 - -
Gma09g01772 664 Pfam Protein tyrosine and serine/threonine kinase 297 565 IPR001245 GO:0004672|GO:0006468
Gma09g01772 664 MobiDBLite consensus disorder prediction 1 146 - -
Gma09g01772 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Gma09g01772 664 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 29 648 - -
Gma09g01772 664 SMART serkin_6 292 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01772 664 MobiDBLite consensus disorder prediction 176 197 - -
Gma09g01772 664 SUPERFAMILY Protein kinase-like (PK-like) 271 565 IPR011009 -
Gma09g01772 664 MobiDBLite consensus disorder prediction 11 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01772 Gma-Chr9 43350757 43354947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01772 106 647 Trihelix Transcription Factor Family AT1G70460 50.276 3.42e-175 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Gma09g01772 PK_Tyr_Ser-Thr 9.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01772 - - gmx:732569 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01772 09 43350757 43354947 Gma09g01772 09 43350757 43354947 ECH
Gma07g00774 07 8181068 8184874 Gma09g01772 09 43350757 43354947 GST