Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01765 ATGATGGAACACAACATCATCGTTAACAACAACAACGTGATCGCACCGTTTGTCATAAAAACCTACAACATGGTGAACGATCCCACCACCGATAAACTCATCATGTGGGGCCCAGCCAACAACAGCTTCATCGTCCTCGACCCCCTCGACTTCTCTCACTCCCTCCTCCCTGCTTTCTTCAAGCACAACAACTTCTCCAGCTTCGTTCGACAACTCAACACTTATGGTTTCAGAAAGGTGGATCCGGATCGGTGGGAATTCGCAAATGAGTGGTTCCTGCGAGGACAGAAGCACTTGTTGAGAAACATCGCGCGGAGGAAGCACGGTGGAGCTGGGAGGAGCAATTTCAATTTGCATTCGCATCATCATCCGTTGAAGGTGGAGGAATTGGACGACGAAGCCATGGTGATGGAGATAGCGAGGTTGAAGGAGGAGCAAAAAGCGTTGGAGGAAGAGCTTCAAGGAATGAACAAGAGGTTAGAGACAACAGAAAAACGACCACAACAAATGATGGCTTTTCTGTCCAAGGTTGTCGAGGACCCGCAGGTTCTTTCTCGGATTCTCCGAGAAAGAGAAAAGAAACACCTGGGCGAGAAAAAGCGCCGCCTAATTCCGCCGCCAACAACGACGGCAGCGACGACGTCGTCGTCGTCGTCCTCCGGCATCAAGACGGAGTTCGAAGAAGACGAAGGTAATTATAATATCATGTCTTCGTCGCCAGAGACAGGGTTGGAAATCGATAATAATAATATTTGTTCGCCTCTGGCGGCGGGGTATTGGGGGGAACAGGGTTGTCATGGGTACAATCGTGGCGCCGTGACGGCGCCGTTGACGGTGGTGGCGCCGGCGGTTCCGACGATGGGAGGAGGGTATTTGGGGCGTGGGGTTTTTTTTGGGGAAATGGCGGCGGAGGGGAATGCGGTGCCGCCTTATCCGTTTTCGTTGTTGGAAGGTGGCTTTTAG 963 0.5192 MMEHNIIVNNNNVIAPFVIKTYNMVNDPTTDKLIMWGPANNSFIVLDPLDFSHSLLPAFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQKHLLRNIARRKHGGAGRSNFNLHSHHHPLKVEELDDEAMVMEIARLKEEQKALEEELQGMNKRLETTEKRPQQMMAFLSKVVEDPQVLSRILREREKKHLGEKKRRLIPPPTTTAATTSSSSSSGIKTEFEEDEGNYNIMSSSPETGLEIDNNNICSPLAAGYWGEQGCHGYNRGAVTAPLTVVAPAVPTMGGGYLGRGVFFGEMAAEGNAVPPYPFSLLEGGF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01765 320 Pfam HSF-type DNA-binding 17 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma09g01765 320 PRINTS Heat shock factor (HSF) domain signature 17 40 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma09g01765 320 PRINTS Heat shock factor (HSF) domain signature 55 67 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma09g01765 320 PRINTS Heat shock factor (HSF) domain signature 68 80 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma09g01765 320 SMART hsfneu3 13 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma09g01765 320 Coils Coil 132 166 - -
Gma09g01765 320 MobiDBLite consensus disorder prediction 207 222 - -
Gma09g01765 320 Gene3D - 9 107 IPR036388 -
Gma09g01765 320 PANTHER HEAT STRESS TRANSCRIPTION FACTOR C-1 15 313 - -
Gma09g01765 320 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 15 313 IPR027725 -
Gma09g01765 320 SUPERFAMILY "Winged helix" DNA-binding domain 14 106 IPR036390 -
Gma09g01765 320 ProSitePatterns HSF-type DNA-binding domain signature. 56 80 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma09g01765 320 MobiDBLite consensus disorder prediction 191 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01765 Gma-Chr9 43257541 43259300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01765 13 320 HSF AT3G24520 44.767 3.47e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Gma09g01765 HSF_DNA-bind 6.1e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01765 K09419 - gmx:100794896 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01765 09 43257541 43259300 Gma09g01765 09 43257541 43259300 ECH
Gma07g00781 07 8287252 8288803 Gma09g01765 09 43257541 43259300 GST