Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01754 ATGGCTGCTCTCTCCAACGGCCACGGCTCTTCCTTCTTCAAGATGCCCCCAATCAAGTTCACAAAGCTCTTCATCAATGGGGAATTTGTTGATTCCCTTTCAGGGAGGGAGTTTGAAACAAGAGACCCTAGGACAGGGGAGGTGATTACAAGAATCGCAGAGGGAGCAAAAGAAGACGTTGATGTTGCTGTCAAAGCGGCACGTGCGGCTTTCGACTATGGTCCATGGCCCCGTATGCCCGGCGCTGAAAGAGCAAAAATTATGATGAAATGGGCAGACTTAGTTGATCAGAACATTGAGGAAATAGCAGCATTGGATGCCATTGATGCTGGAAAGTTGTACCATTGGTGCAAGGCTGTTGATATTCCTGCTGCAGCAAGTACTATCCGTTACTATGCAGGTGCTGCAGATAAAATTCATGGAGAGGTCTTAAAAGCTTCTAGGGAGTTCCATGCATATACTTTGCTAGAACCAATTGGTGTTGTGGGACACATTATTCCTTGGAACTTCCCTAGCACCATGTTTGTTGCGAAGGTTAGTCCTTCCTTGGCTGCTGGTTGCACAATGGTCCTCAAGCCTGCTGAACAAACACCTCTCTCGGCCTTGTTTTATGCTCATCTTGCTAAGCTGGCTGGAATTCCGGATGGAGTGCTTAATGTGGTACCTGGATTTGGCCAAACTGCAGGTGTTGCAATAAGCTTACACATGGACATTGATAAGGTAAGCTTTACGGGTTCGACAGAAGTGGGGCGTGAAGTAATGCGTGCTGCAGCTAATAGTAATTTGAAACCAGTTTCACTTGAACTAGGAGGCAAGTCACCCGTCATAGTTTTTGATGATGCTGATGTAGATAAAGCTGCTGAACTTGCTCTCCTGGGCATCCTATTTAATAAGGGAGAAATTTGTGTTGCGGGCTCCCGTGTGTTGGTTCAAGAAGGAATCTATGATGAATTTGAGAAGAAATTGGTGGAGAAAGCAAAAGCTTGGGTGGTTGGTGATCCTTTTGATCCTAAAGTTCAACAAGGGCCTCAGGTTGACAAGAAGCAATTTGAAAAGATTCTTTCCTATATCGAACAAGGAAAGAAAGAAGGGGCAACTCTTTTGACAGGGGGCAAAAGAGTGGGCAACAAGGGTTACTACATTGAGCCTACAATTTTCTCTAATGTTAAGGAGGACATGCTCATAGTACAAGATGAAATATTTGGCCCTGTGATGGCTTTGATGAAGTTTAAGACTATTGAGGATGCAATTAAGATTGCCAACAATACAAGATATGGCCTAGCATCAGGCATTGTGACAAAGAGTTTGGACACAGCCAACACTGTGTCAAGGTCCATTCGTGCTGGCATTGTTTGGATCAACTGTTACTTTGCCTTTGGGAATGACATTCCTTATGGAGGGTACAAGATGAGTGGATTTGGAAGAGATTTTGGAATGGAAGCCCTACACAAGTATCTTCAAGTTAAATCTGTTGTAACTCCCATTTACAATTCTCCCTGGCTTTGA 1506 0.4436 MAALSNGHGSSFFKMPPIKFTKLFINGEFVDSLSGREFETRDPRTGEVITRIAEGAKEDVDVAVKAARAAFDYGPWPRMPGAERAKIMMKWADLVDQNIEEIAALDAIDAGKLYHWCKAVDIPAAASTIRYYAGAADKIHGEVLKASREFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGQTAGVAISLHMDIDKVSFTGSTEVGREVMRAAANSNLKPVSLELGGKSPVIVFDDADVDKAAELALLGILFNKGEICVAGSRVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEQGKKEGATLLTGGKRVGNKGYYIEPTIFSNVKEDMLIVQDEIFGPVMALMKFKTIEDAIKIANNTRYGLASGIVTKSLDTANTVSRSIRAGIVWINCYFAFGNDIPYGGYKMSGFGRDFGMEALHKYLQVKSVVTPIYNSPWL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01754 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Gma09g01754 501 SUPERFAMILY ALDH-like 13 497 IPR016161 GO:0016491
Gma09g01754 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 501 - -
Gma09g01754 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Gma09g01754 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Gma09g01754 501 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 4 501 - -
Gma09g01754 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Gma09g01754 501 Pfam Aldehyde dehydrogenase family 30 491 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01754 Gma-Chr9 43151795 43159374 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01754 4 501 Aldehyde Dehydrogenase Gene Family AT3G24503 70.060 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01754 K12355 - gmx:100791396 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00791 07 8385503 8392751 Gma09g01754 09 43151795 43159374 GST
Gma05g02255 05 43577721 43583386 Gma09g01754 09 43151795 43159374 PCT
Gma08g00376 08 3147829 3152925 Gma09g01754 09 43151795 43159374 PCT
Gma09g01754 09 43151795 43159374 Gma05g02255 05 43577721 43583386 PCT
Gma09g01754 09 43151795 43159374 Gma08g00376 08 3147829 3152925 PCT