Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01748 ATGGGTTCCATTGGTAACAGCGAGGTTAAAAATCATAATCAGCACCATGAGGATGGTGGTGATAATGGGGTGAATTTCTCGATCCAGAGAGGGTTTGGGACGAAACTGAAGGAGGCGTTGAAGGAAGCGTTGTTTCCGGACGACCCCTTCAGGCAGTTCAAGAAGGAGCAGAAGCCAATGCGGAGAGTGATGAAAGGGGTGCAATACTACATCCCAATCTTTGAGTGGCTCCCTACTTACAATTGGCGCCTCTTTGTCTCTGACTTGATCGCTGGCCTAACCATCTCAAGCCTTGCCATCCCTCAGGGCATTAGTTATGCCAAACTTGCTGACCTTCCTCCCCTCGTTGGCCTTTATTCCAGCTTTGTCCCACCTTTGATCTATGCTGTTTTTGGGAGTTCAAGGCACATGGCAGTCGGGACGATAGCAGGAGCATCGTTGCTTATTGCTCAAACCATACAAACCGTGGCAGACCCAGTAGAAGATCCAACGTTGTATCTTCATTTGATTTTCACCACCACCTTTATCACCGGTGTTTTCCAGGCTTGTTTGGGATTATTTAGGCTGGGGATAGTGGTGGACTTCTTTTCCCATGCTACCATTAATGGCTTCATCGGAGGGACAGCAGTAGCTCTCATCCTCCAACAACTAAAGGGCGTATTTGGAATGAAACATTTTTCAACTAAATCGAACATGGTCGAAGTGGTGAAGAGCATTGTCCGCAATAGACACGAGATTAGGTGGGAACCTGCGGTTCTTGGCGTCATCTTGGTTGCTTTCTTGCAATTTACCAAGCACCTGAGGAATAAGAATCCAAAACTCTTTTGGGTAACGGCTATAGCTCCAATGGTGACTATAGTAGTTTCTGGGGTTTTCACCTACCTCGTCAAGGGCCAAGATCATGGAATTCAAATTGTGGGCCATCTAGATAAAGGACTAAATCCCTTGTCCATCCACTATCTGAACTTTAATTCTAAATATTTACCAGCAGTTATGCAAGCTGGTCTTATCACAGGGGTGTTGTCATTAGCGgaAGGAATAGCAATAGGAAGAAGCTTTGCTGTTGTTGATAATACACCTCATGATGGGAACAAAGAGATGATCGCTTTCGGCCTTATGAACTTGTTCGGTTCATTTACTTCATGTTACTTGACTAGTGGACCATTTTCCAAGACTGCAGTGAATTACAACGCAGGGTGTAAAACTGCGATGGCAAACGTGGTACAGGCAATAATAGTGGCACTCGCACTACTATTTTTGGCGCCACTATTTGGCTTCACCCCTCTTGTTGCCCTTTCAGCTATTATTATTTCTGCCATGCTTGGGCTCATTCCTTTCGAAGAAGTCATCCATCTCTACAAAGTTGACAAGTTTGACTTTGTTATTTGCATGGTTGCCTTCCTTGGAGTTATCTTAGTAAGCATGGATATTGGCCTCATGCTGTCTGTTGGACTCGGCATTCTTAGAGCACTTATGTATGTGGCTAGACCTGCGTCATGCAAGCTTGGAAAGTTACCTGAAATTGGTTTATATAGAGACACGAAGCAATATAAAGTATTAACATACCCAGGAGTTCTTGTTGTACAACTTGGTTCTCCCGTTTACTTTGCAAATTCTTTATACGTCAAAGAAAGGATTATGAGGTACATTCGAAGTGAGGAAAGCTCTACTGGAGATGTAGTTGAGCACATCATACTTGATTTGTCAGGAGTGACAGCCATTGATACAACTTCTATTAAAGCATTGGACGAGTTAATTATAATATTGGGAAAGAATGGAATTAAGGTTTTGTTCGTAAACCCAAGACTGGAGGTGATGGAGAAGCTTATAATGTCCAAGTTTGTTGAGAAAATTGGGAAGGAGTCGTTTTATCTAATATTGGATGATGCAGTGATGGCAAGTCAATATTCACTTCGTTCATCAAAGGCGGCAAATAATGGTCAAGAGGTGGTTTAA 1956 0.4325 MGSIGNSEVKNHNQHHEDGGDNGVNFSIQRGFGTKLKEALKEALFPDDPFRQFKKEQKPMRRVMKGVQYYIPIFEWLPTYNWRLFVSDLIAGLTISSLAIPQGISYAKLADLPPLVGLYSSFVPPLIYAVFGSSRHMAVGTIAGASLLIAQTIQTVADPVEDPTLYLHLIFTTTFITGVFQACLGLFRLGIVVDFFSHATINGFIGGTAVALILQQLKGVFGMKHFSTKSNMVEVVKSIVRNRHEIRWEPAVLGVILVAFLQFTKHLRNKNPKLFWVTAIAPMVTIVVSGVFTYLVKGQDHGIQIVGHLDKGLNPLSIHYLNFNSKYLPAVMQAGLITGVLSLAEGIAIGRSFAVVDNTPHDGNKEMIAFGLMNLFGSFTSCYLTSGPFSKTAVNYNAGCKTAMANVVQAIIVALALLFLAPLFGFTPLVALSAIIISAMLGLIPFEEVIHLYKVDKFDFVICMVAFLGVILVSMDIGLMLSVGLGILRALMYVARPASCKLGKLPEIGLYRDTKQYKVLTYPGVLVVQLGSPVYFANSLYVKERIMRYIRSEESSTGDVVEHIILDLSGVTAIDTTSIKALDELIIILGKNGIKVLFVNPRLEVMEKLIMSKFVEKIGKESFYLILDDAVMASQYSLRSSKAANNGQEVV 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01748 651 ProSitePatterns SLC26A transporters signature. 114 135 IPR018045 GO:0008271|GO:0008272
Gma09g01748 651 Pfam STAS domain 519 630 IPR002645 -
Gma09g01748 651 PANTHER SULFATE TRANSPORTER 20 644 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma09g01748 651 Pfam Sulfate permease family 85 466 IPR011547 GO:0016021
Gma09g01748 651 PANTHER SULFATE TRANSPORTER 3.5-RELATED 20 644 IPR030316 GO:1902358
Gma09g01748 651 TIGRFAM sulP: sulfate permease 72 629 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma09g01748 651 CDD STAS_SulP_like_sulfate_transporter 521 625 - -
Gma09g01748 651 Gene3D STAS domain 497 637 IPR036513 -
Gma09g01748 651 SUPERFAMILY SpoIIaa-like 516 630 IPR036513 -
Gma09g01748 651 ProSiteProfiles STAS domain profile. 515 634 IPR002645 -
Gma09g01748 651 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01748 Gma-Chr9 43083831 43089630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01748 22 642 Inorganic Solute Cotransporters AT5G19600 58.013 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01748 K17471 - gmx:100789107 1221.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01748 09 43083831 43089630 Gma09g01748 09 43083831 43089630 ECH
Gma07g00798 07 8478429 8484679 Gma09g01748 09 43083831 43089630 GST