Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01744 ATGGCGAGTCCCATGAAGGAAGATGAGAAGAACGAGCGCGTGATTCGAGGTCTTCTCAAGCTTCAACATAATCGCAGATGCGTTAACTGCAACAGTCTGGGGCCACAATATGTGTGCATAAATTTCTGGACGTTTGTTTGCACGAACTGCAGTGGAATACACCGGGAATTCACTCATCGAGTAAAATCAGTTTCAATGGCTAAGTTTACTTCACAAGAAGTTAGTGCCCTTCAAGAAGGAGGGAATCAGCGTGCAAAAGAAATTTATTTTAAAGAATGGGATGCACTACGTCATTCTTTCCCTGATAGCAGTAATGTTGACAGGCTCCGAAACTTTATTAAACATGTTTATGTGGATAGAAGATTCACTGGAGACAAGACCAACGACAAACCACAAAGAGGCAAGCCGGGTGACAAAGATGATTTTTATCAAGGAGGATCTATAAGTCCTCATTATGAGGACACATATGAACGTCGTTATAGTGACAGATCTAGTCCAGGTGGAAGAAGTCCTGAATATGATAAAGACAGTAGGCAATATGGTGATCATAAGAGAAGTCCTGGTCGTCCTCCAATAATTAATGATTGGCGCCGTGAAGAACGTAGATTATCAGATGGAGATTATAAGTTGGAAAGCCAATCTCCTGAGCGAGCCAAAGATGTGGATACTTCAAGCCCACCTGTGGTCCGACCTGTTAGAGATATTTTGGGAGAAAATGTAGTGCCTCTTCGGATAAGTGAACCACCCAAAACAAACAGTGGAAGACCTGCTGATAGGTCAGCACCAACACAGAGAACTGCATCTTCCAGTAGCTTGGCTTCTGGCAATGAAAACCCATTAGATGTAAAGCTTGAGACTACTAAGAGCCTTATTGATTTTGATGCTGATCCTGAACCTCCAGTAGCTCCATCAATTCCTCAAGCCCAACAAACTACTGTGCTTCAACCTGTTGTGCAGCCAGCAAACTCTAGTAATGACAATTGGGCCTCTTTTGATGTTGCTCCTGCAACAAAAGCAACTCCAAGCTCCTCAAATTTAAGTCCACTTGAATCAATGTTGTCCCAATTGTCTGTGCCAGCATCTTTACCTGCTCAAGTTTCTGGAGTCCAAGGACCTATTCCAGCATCATCTCTTACTTCTACTTCTGGAGCTGCAAGTGTTAGCGGTTTCTCAGCTTTCCCACCCAGCAATGCTTCAGTACCGTCTCCTGGATTGACATCAGTGTCACCTCTTAATAATGCAGGACAGTGGGCCAATTTGCAACAGCAGCAACCATTTTTCCCTGTTGCTGTTAGTCAGTCTAGTACACAACAATTTATACCACCATTAGGTGGAACAGCAAATAATCAGCCATGGAATGTACCTTCTGCACCCACAGTGCAAGGGCATCCAAGCACACCAATGCCACATACATACCCTCATGCCTCAAAGCCTGCCAATGAGACTATATCCGGTGTTGTTTCACAACCTCCTGTTGCAGAAGTTAGAGCAAGTGGAAGGAAAGAACTTCCCGAGGATCTGTTCACTGTAAAATATTCTTCCTTCCCTGCTCCAGTCCTAGGTTGGCAAATGGGTGTTCCCCATGGCATGGGTATCTCAATGCAATACAATAATGTGCCTGTGCCAAGTTTTCCACAGCCATCAAAGTCAACAAATCCGTTTGATGTCAGCAGTGAACCAACTGCAAATCAAGCCCCAACTTTTCCTTCCATGTCATCCTTGCAAGGTGCCCTGCCTAGTGTACCACCTGCTGGTGCAGTGCACCCTTCAAGCATGGGTAATCCAACACATGGCTGGACTCCTCCCCCAGCATCATCATTTCTGCCTGCACAAGCACAAATGCATGCAACTGCATTGGGACCGAGGGCATATATGGAGCAACAAATTCCGACTAACATGCCAATGCCAAGGCAAGAAGTTGGGAATTTTGGTAACCAAGGAGCTGTTTTTGGCTTGTCAAATCCAAATCAGCAGCTGATCGATTGA 1986 0.4491 MASPMKEDEKNERVIRGLLKLQHNRRCVNCNSLGPQYVCINFWTFVCTNCSGIHREFTHRVKSVSMAKFTSQEVSALQEGGNQRAKEIYFKEWDALRHSFPDSSNVDRLRNFIKHVYVDRRFTGDKTNDKPQRGKPGDKDDFYQGGSISPHYEDTYERRYSDRSSPGGRSPEYDKDSRQYGDHKRSPGRPPIINDWRREERRLSDGDYKLESQSPERAKDVDTSSPPVVRPVRDILGENVVPLRISEPPKTNSGRPADRSAPTQRTASSSSLASGNENPLDVKLETTKSLIDFDADPEPPVAPSIPQAQQTTVLQPVVQPANSSNDNWASFDVAPATKATPSSSNLSPLESMLSQLSVPASLPAQVSGVQGPIPASSLTSTSGAASVSGFSAFPPSNASVPSPGLTSVSPLNNAGQWANLQQQQPFFPVAVSQSSTQQFIPPLGGTANNQPWNVPSAPTVQGHPSTPMPHTYPHASKPANETISGVVSQPPVAEVRASGRKELPEDLFTVKYSSFPAPVLGWQMGVPHGMGISMQYNNVPVPSFPQPSKSTNPFDVSSEPTANQAPTFPSMSSLQGALPSVPPAGAVHPSSMGNPTHGWTPPPASSFLPAQAQMHATALGPRAYMEQQIPTNMPMPRQEVGNFGNQGAVFGLSNPNQQLID 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01744 661 PANTHER ARF GTPASE ACTIVATOR 1 659 - -
Gma09g01744 661 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Gma09g01744 661 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Gma09g01744 661 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Gma09g01744 661 CDD ArfGap_AGFG 12 122 - -
Gma09g01744 661 Gene3D Arf GTPase activating protein 2 133 IPR038508 -
Gma09g01744 661 MobiDBLite consensus disorder prediction 543 577 - -
Gma09g01744 661 MobiDBLite consensus disorder prediction 152 218 - -
Gma09g01744 661 MobiDBLite consensus disorder prediction 256 280 - -
Gma09g01744 661 SUPERFAMILY ArfGap/RecO-like zinc finger 11 124 IPR037278 -
Gma09g01744 661 MobiDBLite consensus disorder prediction 123 280 - -
Gma09g01744 661 PANTHER ARFGAP/RECO-RELATED 1 659 IPR044820 GO:0005096
Gma09g01744 661 MobiDBLite consensus disorder prediction 123 140 - -
Gma09g01744 661 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Gma09g01744 661 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Gma09g01744 661 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Gma09g01744 661 MobiDBLite consensus disorder prediction 543 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01744 Gma-Chr9 43025251 43032782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01744 12 156 C2H2 Transcription Factor Family AT4G05330 31.333 1.58e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01744 - - gmx:100817254 1333.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01744 09 43025251 43032782 Gma09g01744 09 43025251 43032782 ECH