Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01741 ATGGCTGAAACTAAGTCAACCAGTAAGATTGTCAAGAAACAGGACTCGAAAAAAGTTTCTGGTCTCACCAATCAGCCTTCTAGGAAGCAACATCGCAAAGGAGAAAACCCGGTGCGGTTCGTACCAGCTCCTGACCCACCTAGTGATTTTGGACATTCAAACTCCTGGATCTGTAAGAATTCTGCCTGCCGAGCTGTTCTCTCTAAAGATGACACTTTTTGTAGAAGGTGCTCTTGCTGTATTTGTCACCTTTTTGATGATAACAAGGATCCTAGTCTTTGGTTGGTATGCACATGTGAATCTTCTCAAGGGGACTCCTGTGGGTTGTCTTGCCATATTGAGTGTGCTCTTCAACATGAAAAAGTAGGAGTTGTTGATCATGGACAACTGATGCAACTTGATGGTGGTTATTGTTGTGCATCCTGCGGTAAAGTTACCGGGATACTTGGATGTTGGAAGAAGCAGCTAAATATAGCAAAAGATGCCCGGCGTGTAGATGTACTATGTTACAGGATATATTTGAGCTACAGGCTTTTGGATGGTACTTCAAAATATAAAGAATTACATGAAATGGTAAAAGAGGCAAAGGCTAAACTGGAAACTGAAGTTGGTCCAGTTAATGGGGTTTCTGCCAAGATGGCACGTGGGATTGTCAGCAGACTCCCTATTGCCAGTGATGTACAAAAACTCTGCTCTCTTGCTATTGAGAAAGCTGATGAATGGTTGGCCACTGTTCCCAATGTACATCCAGAATCCAGAGAGGGTTCACTTCCTGCTGCATGCAAGGTTGTGTTTGAAGAGGTAACAGCTTTCTCAGTCAAAATCATTTTAATTGAAATGTCAAATGCATCATCTTCTGTGGACATTAAGGGATACAAGCTCTGGTATTACAAAAGTAGGGAGGAGTCACACACTAAAGATCCCGTTTCTGTGTTTCCCAAAGCTCAGAGAAGGATTTTGATATCCAACCTCCAGCCTTGCACAGAATATACATTTCGGATTGTATCTTTTACAGATACGAGTGACCTGGGTCATTCTGAGGCCAAGTGTTTCACCAAGAGCATTGAGATATTGGAAAAGAATTCATCTTCATCAGTTGCCATGAATAAAAAAAAGGAGAACCTTCAAACTGAATGCAATTCTTCTGGCTCCGAAATGGAGCCCAATCCCACAATGGAAGACTCTGGATTTAAGGTTCGAGACCTTGGAAAAATTTTGCATCTTTCTTGGGCTCAAGAACAAGGCTGCTTTGAGGAGTTTTGCTGCGCTGACAAGAGAAATTGCTGTGGGAAAAGTGAAACAATCAAGCCTACCAATCTACAAGAGCAGTTGCCTTCAGTTTCACGCGACCTTGATCTAAATGTTGTTTCGGTGCCTGATTTAAATGAAGAGCTTACACCTCTGTTCGAGTCTTCTAGGGATGAAGATAATGGTTGCACTTTGCAGCAGGCTGTTGAGGCAGATGATGATGCTGCTTCTCATGATTTAGAGAAAAATTTAGCAATATCACACGGTAGTGGTGGTTCCCAAACTTGGAACCATGGACCAACCGGAGAAGTTCCAGCAGTTGACTCTCGCGGAGATGCATGTAGGAAAAGGATGGCAAGCACCAATGAAGAGACACATGATTGCGACAGCACCTTGATAAATGATTCTCCTTTACGCGCATCTGATGGTCCATTCTCCTTAGACGAGAACTTTGAGTATTGTGTGAAAGTAATTCGCTGGCTAGAATGCCAGGGTCATATCAAGCAGGAGTTTAGGTTGAAATTGCTGACATGGTTTAGTTTGAGGTCGACAGAACAAGAACGTAGGGTGGTAAATACTTTCATTCAAACTCTGATTGATGATCCAAGTAGTTTGGCAGGGCAACTAGTTGACTCATTTTCTGATATTATATCCAACAAGAGGCCAAGAAATGGGCTCTCTTCCAATAAGGCTGTGTCATCAAGTTAA 1956 0.4259 MAETKSTSKIVKKQDSKKVSGLTNQPSRKQHRKGENPVRFVPAPDPPSDFGHSNSWICKNSACRAVLSKDDTFCRRCSCCICHLFDDNKDPSLWLVCTCESSQGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLNIAKDARRVDVLCYRIYLSYRLLDGTSKYKELHEMVKEAKAKLETEVGPVNGVSAKMARGIVSRLPIASDVQKLCSLAIEKADEWLATVPNVHPESREGSLPAACKVVFEEVTAFSVKIILIEMSNASSSVDIKGYKLWYYKSREESHTKDPVSVFPKAQRRILISNLQPCTEYTFRIVSFTDTSDLGHSEAKCFTKSIEILEKNSSSSVAMNKKKENLQTECNSSGSEMEPNPTMEDSGFKVRDLGKILHLSWAQEQGCFEEFCCADKRNCCGKSETIKPTNLQEQLPSVSRDLDLNVVSVPDLNEELTPLFESSRDEDNGCTLQQAVEADDDAASHDLEKNLAISHGSGGSQTWNHGPTGEVPAVDSRGDACRKRMASTNEETHDCDSTLINDSPLRASDGPFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISNKRPRNGLSSNKAVSSS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01741 651 PANTHER VIN3-LIKE PROTEIN 2-RELATED 4 645 IPR044514 GO:0010048|GO:0040029
Gma09g01741 651 MobiDBLite consensus disorder prediction 503 526 - -
Gma09g01741 651 SUPERFAMILY Fibronectin type III 263 340 IPR036116 GO:0005515
Gma09g01741 651 MobiDBLite consensus disorder prediction 1 16 - -
Gma09g01741 651 Pfam PHD - plant homeodomain finger protein 58 176 IPR032881 -
Gma09g01741 651 Gene3D Immunoglobulins 251 352 IPR013783 -
Gma09g01741 651 ProSiteProfiles Fibronectin type-III domain profile. 259 357 IPR003961 GO:0005515
Gma09g01741 651 PANTHER VIN3-LIKE PROTEIN 1 4 645 - -
Gma09g01741 651 CDD FN3 288 339 IPR003961 GO:0005515
Gma09g01741 651 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01741 Gma-Chr9 42993383 42995881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01741 54 642 PHD Gene Family AT3G24440 49.091 2.35e-180 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01741 - - gmx:100816714 1333.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01741 09 42993383 42995881 Gma09g01741 09 42993383 42995881 ECH
Gma07g00805 07 8592447 8600920 Gma09g01741 09 42993383 42995881 GST
Gma05g02260 05 43638153 43649106 Gma09g01741 09 42993383 42995881 PCT
Gma08g00382 08 3216149 3219818 Gma09g01741 09 42993383 42995881 PCT
Gma09g01741 09 42993383 42995881 Gma05g02260 05 43638153 43649106 PCT
Gma09g01741 09 42993383 42995881 Gma08g00382 08 3216149 3219818 PCT