Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01694 ATGAGACTAGCCATGTCTACTCCTTCAAAGAGCATAATCTGTTCAAGGGAAGATGATTATGAACTTAGAAGAGGGCCATGGAGTGTTGAAGAGGATGATCTTCTCATCAGTTACATTGCCAATAATGGGGAAGGGAGATGGAATTTGCTTGCTATACGTTCAGGATTAAGGAGAACAGGTAAGAGTTGTAGATTGAGATGGCTAAATTATCTAAAGCCAAATGTTAAGAGAGGAAATTTAACCTCGGAAGAGCAGCTTTTGATTTTTGAACTCCACTCAAAGTGGGGCAACAGGTGGTCAAAAATTGCGCATCAGCTGCCGGGCAGAACAGACAATGAAATAAAGAACTATTGGAGAACAAGGATTCAGAAACGAGCAAAATATCTGAAATTTGAGGCACACAGAAAATCAAGATTTGTAGAATTTGTCAAGGGTCTACAGATGACAAGATATCTTCATAAAGCACAAGAATCATCTCCTTCAGCCATGTCAATCCAAGACCAAGCAATTCCTTTACCTTTTGATGGTGTTACTATTCCTCATTATTCATCATTTGGGATTGGGACAACACCAACAACACAAATCACTTGCCAGGGAGGTCTCAATCATTTGAATCAGCAAGACCAAAACTCAGAATCTGAACACAACAATGGTTCATGCATTTCCTCTTCAGAATCAGCAAATATCCCATATATGAGTCAGCCTTTGGGACACACTACTAGTCAATTTCAGGCCTTAGATAACTGTGACTTTGGCATCTGTTCATATGATGGCTATAGCATAGATAACAATTCCTATGACATGGATGCCTTGAACTTGACAACCACAATGGTTGCTGAGAATCTGGAACTGCCAGTGTTTGATGTCCAAATATCAGAACCCTATTTTATGAACATGGATGAATTGTGGCAATTTAGGAACATACAAAGATGA 933 0.3934 MRLAMSTPSKSIICSREDDYELRRGPWSVEEDDLLISYIANNGEGRWNLLAIRSGLRRTGKSCRLRWLNYLKPNVKRGNLTSEEQLLIFELHSKWGNRWSKIAHQLPGRTDNEIKNYWRTRIQKRAKYLKFEAHRKSRFVEFVKGLQMTRYLHKAQESSPSAMSIQDQAIPLPFDGVTIPHYSSFGIGTTPTTQITCQGGLNHLNQQDQNSESEHNNGSCISSSESANIPYMSQPLGHTTSQFQALDNCDFGICSYDGYSIDNNSYDMDALNLTTTMVAENLELPVFDVQISEPYFMNMDELWQFRNIQR 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01694 310 PANTHER TRANSCRIPTION FACTOR MYB21-LIKE 6 306 - -
Gma09g01694 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 71 IPR017930 -
Gma09g01694 310 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Gma09g01694 310 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Gma09g01694 310 Gene3D - 79 141 - -
Gma09g01694 310 CDD SANT 81 120 IPR001005 -
Gma09g01694 310 SUPERFAMILY Homeodomain-like 21 118 IPR009057 -
Gma09g01694 310 Pfam Myb-like DNA-binding domain 24 71 IPR001005 -
Gma09g01694 310 Pfam Myb-like DNA-binding domain 77 120 IPR001005 -
Gma09g01694 310 Gene3D - 21 77 - -
Gma09g01694 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
Gma09g01694 310 CDD SANT 26 71 IPR001005 -
Gma09g01694 310 MobiDBLite consensus disorder prediction 202 224 - -
Gma09g01694 310 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 6 306 IPR044676 GO:0003700|GO:0006355|GO:0043565
Gma09g01694 310 SMART sant 76 124 IPR001005 -
Gma09g01694 310 SMART sant 23 73 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01694 Gma-Chr9 42591307 42592520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01694 19 164 MYB Transcription Factor Family AT1G68320 62.329 9.14e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma09g01694 Myb_DNA-binding 1.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01694 K09422 - gmx:100778425 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02278 05 43819126 43820924 Gma09g01694 09 42591307 42592520 ECH
Gma09g01694 09 42591307 42592520 Gma09g01694 09 42591307 42592520 ECH