Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01687 ATGTCTGCCAAAAGGTTTTTCAATGATTCTGATCAAGACCCTGAGAATCCTGGCGGAAAACGGATGAGGAATACTAGACCTTCTTTTGCTTCGGTTATAGGAGAAGTGGTTATGGTGAAAAACTTGGAGAACCTTTTCTCAGCCATGGAACCTTTGCTTAAAAGAGTGGTTGGAGAAGAAGTTGACCAAGCTATGAGACAATGGTCACGCTCCTTTGCTAGGTCTCCTTCACTGAGGCTCCAAGCAATGGATCAGCAACAACCTTCAACTTTGCAACTATGTTTCAGCAAAAGGCTTTCCCTTCCAATCTTCACAGGTAGCAGAATTCTTGATGTTGATGGGAACCCCATCAACATAGTTCTAATGGACAAAAGCAATGGCCAAGGAGTCCCCACAAGTCTCTCAAATGCCATCAAGCTAGAGATTGTGGTTGTTGATGGAGACTTTCCTCTTAATGACAATGATGAGGATTGGACTAGTGAGGAATTCAATAGGCACATAGTGAAGGAGAGAAATGGGAAGCGACCATTGCTTGCAGGAGAATTGAATGTGATCATGCGTGATGGAATTGCACCAACCGGAGACATTGAGTTCACTGATAATTCCAGCTGGATTCGCTGCCGGAAGTTCCGAGTTGCGGTGAGGGTGGTACCGGGGACTAATCCAGGCGGTGTTCGGATTCGTGAAGCCATGACTGAGGCGTTTGTTGTTAAGGATCACCGTGGAGAATTGTACAAAAAACACCACCCTCCAATGCTTCATGACGAAGTTTGGCGCCTAGAGAAGATAGGTAAAGATGGAGCTTTCCACAGAAAATTGTCATCAGAGGGGATCAAAACAGTGCAAGACTTTCTCAAACTAGCAGTCATTGATGCTCTTAAGCTAAGAAATATTTTAGGCATGGGGATGTCAGACAAAATGTGGGAAGTCACTATCAAGCATGCAATGACCTGTGACATCGGGAGCAAGATGTACATTTATCGTGGACCAGAGTTTACTATTTTTCTGGATCCAGTGTGCAAATTAATAAGAGCAGATGTCAATGGGCATACATTTTCCAACAGGGATCCGATGAGCCATTTGAATAAGGCCTATATAGACAAATTGGTGAAAGAAGCATATGCTAGATGGAGTAACTTGGAGGAGATTGACGAAGTTCTGAATGATAACATTGCTTTGTTAACCCAAGGTGATCAAACTGTGGAACAATTTGCAAACAATCAACCTGCAGCTGCCTCAGTAGAAACAACATATGATCAGAATCAGTATTACAGTGACAAATCAGGCAGCTATGTAGCAAACAACAATACACAAATGGGATGCTGCGAGTGGTCACTGAATCAAGCCTATAGCCCAGCACCGTTTGCCAATGGCTTTCCTTTTAGTTTCTCAGTGAGACAATCGGATGGTGACATAACCGCTTCAGGTTCTAGCTCTGTGGATGTTGATGGAGCCACAAGGCATAATTAA 1470 0.4361 MSAKRFFNDSDQDPENPGGKRMRNTRPSFASVIGEVVMVKNLENLFSAMEPLLKRVVGEEVDQAMRQWSRSFARSPSLRLQAMDQQQPSTLQLCFSKRLSLPIFTGSRILDVDGNPINIVLMDKSNGQGVPTSLSNAIKLEIVVVDGDFPLNDNDEDWTSEEFNRHIVKERNGKRPLLAGELNVIMRDGIAPTGDIEFTDNSSWIRCRKFRVAVRVVPGTNPGGVRIREAMTEAFVVKDHRGELYKKHHPPMLHDEVWRLEKIGKDGAFHRKLSSEGIKTVQDFLKLAVIDALKLRNILGMGMSDKMWEVTIKHAMTCDIGSKMYIYRGPEFTIFLDPVCKLIRADVNGHTFSNRDPMSHLNKAYIDKLVKEAYARWSNLEEIDEVLNDNIALLTQGDQTVEQFANNQPAAASVETTYDQNQYYSDKSGSYVANNNTQMGCCEWSLNQAYSPAPFANGFPFSFSVRQSDGDITASGSSSVDVDGATRHN 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01687 489 Pfam Calmodulin binding protein-like N-terminal domain 91 240 IPR046831 -
Gma09g01687 489 PANTHER OS02G0177800 PROTEIN 1 480 IPR012416 GO:0005516
Gma09g01687 489 PANTHER PROTEIN, PUTATIVE-RELATED 1 480 - -
Gma09g01687 489 Pfam Calmodulin binding protein central domain 252 318 IPR046830 -
Gma09g01687 489 Pfam Calmodulin binding protein C-terminal domain 323 383 IPR046829 -
Gma09g01687 489 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01687 Gma-Chr9 42488341 42493696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01687 3 384 Calmodulin-binding Proteins AT5G57580 48.082 6.98e-115 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01687 - - gmx:100803213 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01687 09 42488341 42493696 Gma09g01687 09 42488341 42493696 ECH
Gma07g00853 07 9074301 9078704 Gma09g01687 09 42488341 42493696 GST