Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01686 ATGAACCCAAAACAGCTCCTCCTCCTCTTCTTTTCTCTCTTTCTCACAATCACTTTCTCGTTGAACGAAAGATTTGAAGCCTGCGATGCCAAGACATGTGGGAACGGGCAGAACATAAGCTACCCATTCTACATCCAAGGCAAGCAAAAACCCTTTTGCGGGCAGCCAGGCTTCGAGCTAACGTGCAGCCACAACGGTTTCCCAATTCTGACTCTCATGTACACCCCATACACAATCCACCAAATTTTCTACGACAACCAATCTCTCCGAGTGTCCAATCCCGTCTTTTCACAACCAAACCTTTCTTCTTGTATTGCCCCGACTCAGAACCTCACGGTCGGAAGGTACAGATTCCGAGTCGCTCCGAACCAGAGGGAACTGTTCGTGCTGTACGGCTGCGACTCAGCGGCGCTTCAGAAAACGGTGCCGGAGCGGAGGATCTGGTGTTCTGCGGCGGGAAACGAAACGACGTCGGTTGTGGGGTTGGATAAGGGGGATCGGGATTTGGTTTCGGCGCGGGAGAGTTGTAAGGGTGGTGCTGTGAATGCGACGGTGGATGATTTGAAAGGAGGGGTTAGAGAGGCGCTGCAGAGAGGGTTTTTGTTGCTTTGGAATGCGACTAGCTGCAGCGAGTGCAAGAGTAGTGGAGGGAGGTGCGGCTTCGACATCGACCCTCGTGTCTATGCTTTTAGGTGTTACTGTCCTGATAGGCCTCATGCTGTCAAATGTACCAATACAGATCCGCGGAAGTTGAGACTCATTATAGGTCTTGCAAGTGCACTAATGGGAGGATTCATGATATGCATCATAATTTGCTGTACTAAATCTAAGTCATCCACACAAGTAAAATTCTCGTTTACGATAAAGAATGGCCAAGATATAGAATCATTCTTAAAAAACCATGGAGCTCTATCACAGAAGAGATACAAATTTTCAGAAGTTAAGAAAATGACCAACTCCTTCAAAGTTAAACTAGGTGAAGGTGGTTTTGGTGCAGTATACAAAGGAGAGCTACTCAGTGGTGTTCCTGTGGCCGTAAAGATATTGAATGAATCCAAAGGAAATGGTGAAGACTTCATCAATGAGGTTGCTAGCATCATTAGAACTTCTCATGTCAATGTTGTCACACTTGTTGGATTCTGTTTGGAAGGACGCAAGAAAGCTCTCATTTATGAGTTTATGCCCAATGGTTCCCTTGACAAGTTTGTATACAAAAAGGGTCTCGAAACCACTTCATCCTTGAGTTGGGATAATTTCTGGCAAATTGCCATAGGTATAGCCCGAGGACTAGAGTACTTGCATAGGGGTTGCAACACTCGAATTTTACATTTTGACATAAAGCCACATAACATTCTTTTGGATGAGAATTTCTGCCCTAAGATATCAGATTTTGGGCTTGCAAAGCTTTGTCCTAGGAAAGAGAGCATTATTTCCATGTCAGACCCTAGAGGAACAATAGGATATGTAGCTCCAGAAGTATGGAATAGAAATTTTGGCGGAGTTTCACACAAATCTGATGTTTACAGCTACGGAATGATGCTACTAGAAATGGTGGGAGGGAGAAAGAATATTAATGCGGAAGCAAGTCACACAAGTGAGATATACTTCCCACATTGGATCTACAACAGGCTAGAGCAGGGTGGAGATTTGAGACCTAATGAGGTGATGGCAACGGAAGAAAATGAGATAGTAAAGAGAATGACTGTAGTGGGCTTATGGTGCGTTCAAACCTTTCCAAAGGATAGACCTACTATGACTAGAGTAGTAGATATGCTAGAAGGCAAAATGAATTCCCTGGAAATCCCCCCAAAACCTGTTCTTTCTTCTCCCACTAGGTCAGTGTCAGAATCTCCCACAAGATGA 1863 0.4482 MNPKQLLLLFFSLFLTITFSLNERFEACDAKTCGNGQNISYPFYIQGKQKPFCGQPGFELTCSHNGFPILTLMYTPYTIHQIFYDNQSLRVSNPVFSQPNLSSCIAPTQNLTVGRYRFRVAPNQRELFVLYGCDSAALQKTVPERRIWCSAAGNETTSVVGLDKGDRDLVSARESCKGGAVNATVDDLKGGVREALQRGFLLLWNATSCSECKSSGGRCGFDIDPRVYAFRCYCPDRPHAVKCTNTDPRKLRLIIGLASALMGGFMICIIICCTKSKSSTQVKFSFTIKNGQDIESFLKNHGALSQKRYKFSEVKKMTNSFKVKLGEGGFGAVYKGELLSGVPVAVKILNESKGNGEDFINEVASIIRTSHVNVVTLVGFCLEGRKKALIYEFMPNGSLDKFVYKKGLETTSSLSWDNFWQIAIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIISMSDPRGTIGYVAPEVWNRNFGGVSHKSDVYSYGMMLLEMVGGRKNINAEASHTSEIYFPHWIYNRLEQGGDLRPNEVMATEENEIVKRMTVVGLWCVQTFPKDRPTMTRVVDMLEGKMNSLEIPPKPVLSSPTRSVSESPTR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01686 620 SMART serkin_6 319 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01686 620 SUPERFAMILY Protein kinase-like (PK-like) 304 593 IPR011009 -
Gma09g01686 620 Pfam Protein tyrosine and serine/threonine kinase 321 592 IPR001245 GO:0004672|GO:0006468
Gma09g01686 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Gma09g01686 620 PANTHER RUST RESISTANCE KINASE LR10-RELATED 246 618 IPR045874 GO:0004672
Gma09g01686 620 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 246 618 - -
Gma09g01686 620 Pfam Wall-associated receptor kinase galacturonan-binding 28 92 IPR025287 GO:0030247
Gma09g01686 620 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
Gma09g01686 620 Gene3D Phosphorylase Kinase; domain 1 281 393 - -
Gma09g01686 620 MobiDBLite consensus disorder prediction 600 620 - -
Gma09g01686 620 Gene3D Transferase(Phosphotransferase) domain 1 394 607 - -
Gma09g01686 620 ProSiteProfiles Protein kinase domain profile. 319 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01686 620 Pfam Wall-associated receptor kinase C-terminal 187 236 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01686 Gma-Chr9 42433330 42441225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01686 16 607 Receptor kinase-like Gene Family AT5G38260 39.257 2.68e-140 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gma09g01686 PK_Tyr_Ser-Thr 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01686 - - gmx:102665158 781.556