Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01683 ATGGCTCTTCCTCTTCTTCCACCTCTTTCTTCAATCATCAACACCCTTTTCTTCTTTACACTCTTCTTCCCAAAATATGTATGGAGTGATGTTGAAGGGTACTCAGCATGTGAACCTTTTAGCTGTGGTGAAATCGACAACATTCGCTACCCATTTTGGAGTAGTGATCATCAACAAAGTTATTGTGGGCATCCAAAGTTCAAGCTTGATTGCCAACAAGACAACGTGACAATTGACATGATGTCGCAGAGATTCCATGTTATTGATATTGATCAAACATCTAAGGTTTTGAAGATGGCAAGGTTGGATTTATGGGATGACCCTTGTACTAATGAGTATAGCAATGTCAAGTTGGATTCTGATTTCTTCAACTACACTTCCAATGATGATGACTATACTTTGTTATATGATTGTGGTCCTCCTGTTACATATACGTCTAGTGTGAATATTAAAGGAACAATATCATTTAGTTGCCCCATAGATAGTGGTTTTCGAGATGCATTCTTTGTGTCAAGTACTGATGTGGGTAATTTGAAGGATCTGGGGTGCAAGCATAGCATCAATGTTTCTGTTCTAAGAGAGGCTGTGAAGGATGCTTTGCAAGTGGAAAATGTTTTAGAAAAAGGATTTGAGGTAGGGTGGATTGGTGTGGATGAAGGACAATGTGATGGTTGCATAAAATCTGGTGGGAGATGTGGACACAACGTATCTAAGGATGCATTTACGTGCCTCTGTCCTAATCAGCAATCTTATGATGAGGTTTGTAGCAAAAGCCAAACAAGTTCTCCCTTAGCAGCACCAACGCCTAAACCAACACCAGAACAGGAACTGTCACCCCCTTTTGGTCCAAAATTTCAAGAAAAGTCTCCACATGCTCCGAATCCGCGGAAGTTGAGACTCATTATAGGTGTTGTTTCTGGTGTGGTGGGAGCACTTGGTATGGGCATTATCGGCTTTCTCTGTTATCGTAGAAAGAAGAATCGTTATGCAATCTCATATATACAATCTCGTAGCCTCTCTTCTGATCCATCTTCAAAAGACACTGAGAAGGGAGTTCAAAGCTTTACTCAAAGCTTTGTACCAGGAGTGCCCCTcttcttgtatgatgaacttgaagaggccacaaattactttgactcatctaaagaactaggagaagggggatttggaactgtgtaTTTTGGCAAACTGCGGGACGGGCGTTCTGTTGCAGTGAAGAGGTTGTATGAGAACAACTTCAAGAGAGTTGCACAGTTCATGAATGAAATTAAAATCCTAGCAAAGTTAGTTCATCCAAATCTTGTGAAGTTATATGGATGCACCTCTCGCCACAGCCGCGAACTTCTGCTTGTATACGAGTACATTCCTAATGGAACCGTTGCTGATCATCTTCATGGTCAACGATCCAAACCTGGAAAACTCCCTTGGCATATTAGAATGAAAATTGCTGTGGAGACTGCAAGTGCATTGAATTTTCTTCATCACAAAGACGTCATCCACCGAGATGTGAAAACCAACAATATTCTTCTTGACAGTGACTTTTGTGTCAAAGTGGCAGATTTTGGACTCTCGCGTCTTTTCCCAGACCATGTCACCCATGTTTCAACAGCTCCACAAGGGACTCCAGGTTATGTGGATCCCGAGTACCACCAGTGCTACCAGCTTACTAAACAAAGCGACGTATATAGCTTTGGAGTGGTTCTGGTTGAGCTGATATCATCCTTGCCTGCTGTAGATATCACAAGGCATAGACATGAAATCAATTTGTCCAACATGGCCATCAACAAGATTCATAATCAGGCACTGCATGAGCTTGTCGACCCTACCCTCGGGTTTGAATCCGATTTCAAAGTCAGGAAAATGATAAATGCTGTGGCTGAGTTAGCATTTCAGTGCTTGCAGAGTTCTAAAGAGATGAGACCTTCTATGGAAGAAGTGGTGGAGACTCTCAAGGATATACAGAGTGATGGCAAACATAAAAGCCAGCCTGAGGTAATGGACATCACAAGCACAGCTGATGATGTTGTGTTGCTCAAGGATGACCCTCCTCCACCATCACCTGATTCTAATGCGGTGAGCAAGTCGACAACGCCAAATGCTAGCGGATAA 2109 0.4083 MALPLLPPLSSIINTLFFFTLFFPKYVWSDVEGYSACEPFSCGEIDNIRYPFWSSDHQQSYCGHPKFKLDCQQDNVTIDMMSQRFHVIDIDQTSKVLKMARLDLWDDPCTNEYSNVKLDSDFFNYTSNDDDYTLLYDCGPPVTYTSSVNIKGTISFSCPIDSGFRDAFFVSSTDVGNLKDLGCKHSINVSVLREAVKDALQVENVLEKGFEVGWIGVDEGQCDGCIKSGGRCGHNVSKDAFTCLCPNQQSYDEVCSKSQTSSPLAAPTPKPTPEQELSPPFGPKFQEKSPHAPNPRKLRLIIGVVSGVVGALGMGIIGFLCYRRKKNRYAISYIQSRSLSSDPSSKDTEKGVQSFTQSFVPGVPLFLYDELEEATNYFDSSKELGEGGFGTVYFGKLRDGRSVAVKRLYENNFKRVAQFMNEIKILAKLVHPNLVKLYGCTSRHSRELLLVYEYIPNGTVADHLHGQRSKPGKLPWHIRMKIAVETASALNFLHHKDVIHRDVKTNNILLDSDFCVKVADFGLSRLFPDHVTHVSTAPQGTPGYVDPEYHQCYQLTKQSDVYSFGVVLVELISSLPAVDITRHRHEINLSNMAINKIHNQALHELVDPTLGFESDFKVRKMINAVAELAFQCLQSSKEMRPSMEEVVETLKDIQSDGKHKSQPEVMDITSTADDVVLLKDDPPPPSPDSNAVSKSTTPNASG 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01683 702 Gene3D Transferase(Phosphotransferase) domain 1 455 667 - -
Gma09g01683 702 Gene3D Phosphorylase Kinase; domain 1 350 454 - -
Gma09g01683 702 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 12 692 - -
Gma09g01683 702 SMART serkin_6 378 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01683 702 CDD STKc_IRAK 384 653 - -
Gma09g01683 702 Pfam Protein tyrosine and serine/threonine kinase 381 650 IPR001245 GO:0004672|GO:0006468
Gma09g01683 702 SUPERFAMILY Protein kinase-like (PK-like) 360 667 IPR011009 -
Gma09g01683 702 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 12 692 IPR044652 -
Gma09g01683 702 ProSiteProfiles Protein kinase domain profile. 378 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01683 702 MobiDBLite consensus disorder prediction 654 702 - -
Gma09g01683 702 ProSitePatterns Protein kinases ATP-binding region signature. 384 406 IPR017441 GO:0005524
Gma09g01683 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Gma09g01683 702 Pfam Wall-associated receptor kinase C-terminal 182 247 IPR032872 -
Gma09g01683 702 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Gma09g01683 702 MobiDBLite consensus disorder prediction 260 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01683 Gma-Chr9 42392352 42402668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01683 297 702 Receptor kinase-like Gene Family AT1G25390 55.875 9.07e-145 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma09g01683 PK_Tyr_Ser-Thr 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01683 - - gmx:100800873 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01683 09 42392352 42402668 Gma09g01683 09 42392352 42402668 ECH
Gma07g00860 07 9271657 9279165 Gma09g01683 09 42392352 42402668 GST