Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01682 ATGAGATTGAGGCGTGATATCTTTGTGTGCTGTTTCACTAGCACATCTTCAGACACAATGCAAAAGGAAAAGCACAGTAAGTTGAAGTGGCGAATCTTTCCCTACAAGGAACTTAGAAAAGCCACAAATAATTTTGATCGATTTCATTTCATTGGAAAGAGAGGTGGAAAGACAGGCCTTATCACTCAATATCACGGAAAACTTGAGGATGGACGTGAGATTACAATTCAGCGCTTTAACGGAGACCAGCGCTACTTATTACAACAGTTTATCAATGAAACTATTATCCTAAATTACTTGCCTCACAAAAATATTGTGTCAATTTACGGGTGTGCTTCTCATCATGAGGAATCTCTGCTAGTGACAGAATACCTATCCAATGGCAATCTTGCTGCTCATCTTCATAGTGAAAAGGACGAAAAGATTACACTACCTTGGCTTAAACGATTGGATATAGCATTTGATATTGCAAATGCATTGAACCATCTTCACAATTATGGCATCATCCACCGCAATGTGAAGTCCAGTAATATTTTCCTAGATGCGAACTTTTGTGCAAAAGTTGGTAACCTTCTTTTGTCGCAGAAACTTCCAGATGGAGTTCCGGTGCATGCGACCCATGTTACTGGTGATAGGGCAGGGTCAAGTGGTTATATGGACCCAGAGTATTTGACAAAAGGCCAACTTAGCGTAAAAAATGATGTTTATAGCTTTGGGGTGGTTTTGTGTGAGCTTCTATCATCGACGCTGGCAAAAGACTGGTTTCTGAATGAAGAGGATAATATTGCTACCGTTTTAAGCAAAAAAATGGAAAACCAAGCTTTGGTGGAGCTGTTGGATCGAAGACTTGGCTTCGACTCAAACCTTAAGATCAAGCAGGTAATGACTGCTACAGCTGAGCTTGCATTTATGTGCATGAAATGTCCACAAGAATTAAGGCCAAACACGGAACAGGTGCTAGAGATTCTCAATGGCATAAAGCCAGGGAGAATTGAAACAGGCTCTTACTCAACAAAAGATATCTCAGCTTTGAAAATCTTCCACAATGCTgaacttgaagaagctactaacaattttgacaatttccttggaaagggagggtatggaagcgtgtacTATGGGAAACTTAAAGATGGGCGAGAGGTTGCAGTAAAATGTTTCCATGAAGAGAACGAGACAGAAGAGACCATTAAGCAATTCATGAAAGAAACTGACATCTTAGGTCTCTTGCACCATCAAAATCTGGTTTCACTTTATGGCCGCACTTCTCGCAATTGCGACAAACCCATGCTAGTTTACGAGTACATCTCCAATGGCACTCTTACTAAACATCTTCATGAATCTTCCCATGGTAAACTACCATGGCATACTAGATTGAATATTGCCATTGAAACTGCAGCTGCCTTGGTATTTCTTCATGACTCAGCTATCATCCACCGTGACGTAAAAGGGAGTAACATTCTGTTGGATGAAAATTTTACTGTCAAAGTTGCAGATTTTGGATTCTCACGGTCTCTTCCAGATCATGCTACTCATGTTTCAACTATTCCAGTAGGAACACGTGCTTACATAGATCCTGACTACTATGAATCTGGAAGAGTTAGTGACAAAAGTGATGTCTATAGTTTTGGGGTGGTCTTGTTCGAACTCATATCATCCATTCGCCCAAGTTCATTGGAAGGCACAGATGATGATACTCTCGCACAGTATGCAAAGAGAAAAATCTTAAACAATCAATTAAACGAGGTAGTGGATCCAAGTTTTCGGTTTGGTTCTGATAAAAACATAATGGAAATGATAACAGCAGTAGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGAATTCAGGCCATCCATGAAACAGCTGCTACAGACCCTTCAGGGCATTAGGGAAGGAACATGGGGATTCAACCAGATAACATAG 1929 0.3919 MRLRRDIFVCCFTSTSSDTMQKEKHSKLKWRIFPYKELRKATNNFDRFHFIGKRGGKTGLITQYHGKLEDGREITIQRFNGDQRYLLQQFINETIILNYLPHKNIVSIYGCASHHEESLLVTEYLSNGNLAAHLHSEKDEKITLPWLKRLDIAFDIANALNHLHNYGIIHRNVKSSNIFLDANFCAKVGNLLLSQKLPDGVPVHATHVTGDRAGSSGYMDPEYLTKGQLSVKNDVYSFGVVLCELLSSTLAKDWFLNEEDNIATVLSKKMENQALVELLDRRLGFDSNLKIKQVMTATAELAFMCMKCPQELRPNTEQVLEILNGIKPGRIETGSYSTKDISALKIFHNAELEEATNNFDNFLGKGGYGSVYYGKLKDGREVAVKCFHEENETEETIKQFMKETDILGLLHHQNLVSLYGRTSRNCDKPMLVYEYISNGTLTKHLHESSHGKLPWHTRLNIAIETAAALVFLHDSAIIHRDVKGSNILLDENFTVKVADFGFSRSLPDHATHVSTIPVGTRAYIDPDYYESGRVSDKSDVYSFGVVLFELISSIRPSSLEGTDDDTLAQYAKRKILNNQLNEVVDPSFRFGSDKNIMEMITAVAELAFQCVQCPKEFRPSMKQLLQTLQGIREGTWGFNQIT 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01682 642 Gene3D Phosphorylase Kinase; domain 1 332 435 - -
Gma09g01682 642 Gene3D Transferase(Phosphotransferase) domain 1 125 331 - -
Gma09g01682 642 SMART serkin_6 357 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01682 642 SMART serkin_6 45 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01682 642 Pfam Protein tyrosine and serine/threonine kinase 83 322 IPR001245 GO:0004672|GO:0006468
Gma09g01682 642 Pfam Protein tyrosine and serine/threonine kinase 360 628 IPR001245 GO:0004672|GO:0006468
Gma09g01682 642 PANTHER TYROSINE KINASE FAMILY PROTEIN 25 642 - -
Gma09g01682 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Gma09g01682 642 ProSitePatterns Protein kinases ATP-binding region signature. 363 385 IPR017441 GO:0005524
Gma09g01682 642 ProSiteProfiles Protein kinase domain profile. 45 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01682 642 SUPERFAMILY Protein kinase-like (PK-like) 339 632 IPR011009 -
Gma09g01682 642 Gene3D Phosphorylase Kinase; domain 1 18 124 - -
Gma09g01682 642 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 25 642 IPR044652 -
Gma09g01682 642 Gene3D Transferase(Phosphotransferase) domain 1 436 636 - -
Gma09g01682 642 ProSiteProfiles Protein kinase domain profile. 357 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01682 642 SUPERFAMILY Protein kinase-like (PK-like) 23 323 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01682 Gma-Chr9 42374195 42378314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01682 344 632 Receptor kinase-like Gene Family AT1G25390 51.864 5.24e-89 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma09g01682 PK_Tyr_Ser-Thr 5.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01682 - - gmx:100776297 1291.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00861 07 9293193 9305186 Gma09g01682 09 42374195 42378314 GST