Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01673 ATGCCTGTTGTGACAGAACACATGAAATGGAGAAGACCAAGAAACCAATTTAGGAACCCCATTTCAGAAACCGATGATCCAATCACTCAAATCCCTTCCATAATCCAATCCTCTCACAGCAAATCCACCATCTCCTCTCTCTTGTCTTCTTTCTCCACCTCCGGTGAAACCACACATGCCAGAGACCAAAACAGAACCAACAACAACAACAAAAGCAACAGAAAATTCTCTGCAGCAACCTTCAGGGGCTTCGGCTGCACTGCCGGTTCATCGCAGAAGGTGTCGGTGCCGGCGGTGATTCGCTCCTCAGCAGATTGGGAAGGGAAGAGGAACAGAAAGAAGAATCACAGAAGGAAGAGTAACAGTAACGGTAACAGTGGCAACAACACATGTGATGATGATGATGTTTCTGGTGGAACATTTGTGGATTTTCAGGATGTTTCGTGTGGCCCTGGAATTGGATTCTCAACTGATGCTGCATCTGTGGAATGTGCTGTGGCTAGGAAGAATGTGTCTTCAAGAGGAAAACTTGATGTGGTGGAAGAGAGGGTAACACACAGGGAGCGTTCATCTTATTTTGGAAGGCGCACTGTGAAGCCAGAAAGCTTCTCCTTTCTGGATGATGAACCTGACATTTTTGCAGCACGCCCTGGATTAGAGCCTTTTGGCACTGCTAGATTCTATCGCCATGTTCCACATCCTTCCCCTGATGGTCTTGCTGAGATAATGATAATTCGAGGAAGAATAATGATGGGGGGACGATTTAATTCACACGACCAATTTAGAGACTGGAGACTTGATGTTGATAACATGTCATACGAGCAATTGCTTGAACTGGGTGAGAGAATCGGTTATGTCAACACTGGGCTCAAAGAAGATGAGATGGGACTCAACATAAGGAAAGTTAAGCCTTCAAGTTCAAATGATACATCAAAGCATCAACTAGACAAAAAGTGCAGTGTTTGTCAGGAGGAGTATGAATCAGATGATGAGCTGGGGAGATTGAAGTGTGACCACAGCTATCATTTTCAGTGTATAAAACATTGGCTTGAGCATAAAAATTTCTGCCCAGTTTGTAAGCAAGAAGTTGTGGTTCGACACTAA 1104 0.4447 MPVVTEHMKWRRPRNQFRNPISETDDPITQIPSIIQSSHSKSTISSLLSSFSTSGETTHARDQNRTNNNNKSNRKFSAATFRGFGCTAGSSQKVSVPAVIRSSADWEGKRNRKKNHRRKSNSNGNSGNNTCDDDDVSGGTFVDFQDVSCGPGIGFSTDAASVECAVARKNVSSRGKLDVVEERVTHRERSSYFGRRTVKPESFSFLDDEPDIFAARPGLEPFGTARFYRHVPHPSPDGLAEIMIIRGRIMMGGRFNSHDQFRDWRLDVDNMSYEQLLELGERIGYVNTGLKEDEMGLNIRKVKPSSSNDTSKHQLDKKCSVCQEEYESDDELGRLKCDHSYHFQCIKHWLEHKNFCPVCKQEVVVRH 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01673 367 MobiDBLite consensus disorder prediction 97 131 - -
Gma09g01673 367 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 296 366 IPR013083 -
Gma09g01673 367 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 3 367 IPR045191 GO:0061630
Gma09g01673 367 MobiDBLite consensus disorder prediction 46 75 - -
Gma09g01673 367 MobiDBLite consensus disorder prediction 1 27 - -
Gma09g01673 367 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 3 367 - -
Gma09g01673 367 SUPERFAMILY RING/U-box 318 365 - -
Gma09g01673 367 Pfam Ring finger domain 318 360 IPR001841 -
Gma09g01673 367 SMART ring_2 319 359 IPR001841 -
Gma09g01673 367 ProSiteProfiles Zinc finger RING-type profile. 319 360 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01673 Gma-Chr9 42277459 42282981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01673 4 274 C3H Transcription Factor Family AT1G73760 37.716 7.64e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01673 - - gmx:100818517 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02345 05 44372411 44375818 Gma09g01673 09 42277459 42282981 ECH
Gma09g01673 09 42277459 42282981 Gma09g01673 09 42277459 42282981 ECH
Gma07g00877 07 9477839 9484656 Gma09g01673 09 42277459 42282981 GST