Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01671 ATGGATCCTCCACCCCTCTCTGCCACCACTCAAAAAAACCATCCTGACTCAGTAGAGTCTTTCTCTCCACGTTCCCGAAACTCGGAAACGTGGAATGATGAGACTCTACCGGCCGTTCCTGGCGCTAAGCTGCGCCTCATGTGCAGCTACGGTGGCCACATCATGCCACGCCCTCACGACAAGTCTCTCTGCTATGTCGGCGGTGACACGAGGATCGTCGTTGTGGACCGCCATTCGTCGTTGAAAGACTTGTGTGCAAGGCTTTCCCGAACCATTCTCAATGGAAGACCCTTCACACTCAAGTACCAGCTTCCCAATGAAGACCTTGATAGCCTAATCACTGTTACCACTGACGAAGACCTTGACAACATGGTGGAAGAGTATGATCGTATAATGGCAAAAGGTTCGGCTTCTTCGCGGCTCAGGTTGTTCTTGTTCTTCACCAAACCTGAGGCCACAGTTTCAATGGGGTCACTCCTTGATGATTCCAAGTCAGAGACATGGTTTGTTGATGCACTTAACAACTCTGGCATGATATCAAGAGTGGTGTCAGATTCTGCTGCAGGGGATTCCTTTGTTAACCTTGAtggtgttggtgttggtgttggtgttggtgttAGTGCTAGTGGTTCAAGCAACAACTTGGAGGCTTTGCCTGATGCTAACAACTGCAAGGTTAAGAATTTGCCTGAAGTGGTGCAAGTGCAATCAACACCTGGTTCACCTATGATGGAGAACAACAGTTCTTCTTCTCCTTCTTTCTCTCCTTCTCTAGCTAATCTACCTCCGATTCGGGTTCGTGTTGATGACAATGGTAGTAGGCTTCATCAAGAGAACAAGGTCGGGATGGTGGTGGAGGAGCAGTTTGCTCAGATGACAATTGCAAGTGGGGTGAAGCCAGATGATGGATTGGTGAATGTTGTTTCTTCTACAGTGCCTGTGCCTGTAATTCCTGCAGCTGTGACCATGGCATCAGTTGGGGTGATTACTACTAGTGATAATGTGATGAATAGAGTTGTTTATGAGGATGAGAGGTCAGATCCTGGGTTTCGGAAGCCCCCTTTGCCAATGCAGCTTGTGCAGCCTAGGACTAGTGGTGGCGTGGGTTTGCCTTCTCCTGATTCAGTAGCAAGTGATAGTAGTATTGCATCTGCAAATTCTTTCTCCAAGACTGTTTACTACCAAGATCAAGTCCAAGCCACACTACTAGACAACAAAGTTGTTGCTGCTATGCCAAATGCAAAGAGTGAAATATCTGATCAGATGATTCAGGTCCAAGGACAACTTCAAGATTCTGGCTACACATTACCCCCACAATTGGATCAAACCAAGCAACAATTCCAGCAGCAGCAGCCATTGATCCATGCCAACAATCACTACATCCACCACCCTGCAGCCACAGGTCCAGTGCCAGTTTCATCATACTACCCAGTTTATGCCCCACCACCACAACTACAACAACTTCACCCTCATATAAGTCAACAACAGTACCCAGTTTATGTGATGCCTGTTGGACCTACACAAGTAACACAACCCTACAACATGGCATTGCAGCACAATATTTCTGACCCTAATGTGGTAGCTTCAAGCAGGCCATTAATGCCACAAAGTGTTGTTACCTCAGCAGCATACAAAGATGGTACTCCACCTATTTACTCCACCAAGTCACTTAGCCCAACTATGGCTCCATCAAATCCTGGATATGCTCCAATACCTACCAACCAATTTCAGCCACAGTATGTGGGTTTGTCTCAGTTCCACCATCAACCACAGTCCATTGCTGTGGCTCCCTCTAGTACTACTACTACTACTACTAATTATGGCTATGAATATGGTGGCCATTTGCAAGATCAAGCTTACTACACTCAACAACAAACCACTAATGCTACATTGCTTCCTCAGTACCAATCCATGACCCCAGCTGCAGCTGCTGCAGCACTATCAGATGCTTCAAAACAGTTTCCTGCAGACAACATTCAGCAGCCAAATAGAGCATCACAACCAGTATGA 2010 0.4607 MDPPPLSATTQKNHPDSVESFSPRSRNSETWNDETLPAVPGAKLRLMCSYGGHIMPRPHDKSLCYVGGDTRIVVVDRHSSLKDLCARLSRTILNGRPFTLKYQLPNEDLDSLITVTTDEDLDNMVEEYDRIMAKGSASSRLRLFLFFTKPEATVSMGSLLDDSKSETWFVDALNNSGMISRVVSDSAAGDSFVNLDGVGVGVGVGVSASGSSNNLEALPDANNCKVKNLPEVVQVQSTPGSPMMENNSSSSPSFSPSLANLPPIRVRVDDNGSRLHQENKVGMVVEEQFAQMTIASGVKPDDGLVNVVSSTVPVPVIPAAVTMASVGVITTSDNVMNRVVYEDERSDPGFRKPPLPMQLVQPRTSGGVGLPSPDSVASDSSIASANSFSKTVYYQDQVQATLLDNKVVAAMPNAKSEISDQMIQVQGQLQDSGYTLPPQLDQTKQQFQQQQPLIHANNHYIHHPAATGPVPVSSYYPVYAPPPQLQQLHPHISQQQYPVYVMPVGPTQVTQPYNMALQHNISDPNVVASSRPLMPQSVVTSAAYKDGTPPIYSTKSLSPTMAPSNPGYAPIPTNQFQPQYVGLSQFHHQPQSIAVAPSSTTTTTTNYGYEYGGHLQDQAYYTQQQTTNATLLPQYQSMTPAAAAAALSDASKQFPADNIQQPNRASQPV 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01671 669 MobiDBLite consensus disorder prediction 1 35 - -
Gma09g01671 669 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 1 662 - -
Gma09g01671 669 Pfam PB1 domain 59 146 IPR000270 GO:0005515
Gma09g01671 669 PANTHER OS05G0427100 PROTEIN-RELATED 1 662 - -
Gma09g01671 669 SUPERFAMILY CAD & PB1 domains 59 156 - -
Gma09g01671 669 MobiDBLite consensus disorder prediction 238 261 - -
Gma09g01671 669 MobiDBLite consensus disorder prediction 644 669 - -
Gma09g01671 669 ProSiteProfiles PB1 domain profile. 43 148 IPR000270 GO:0005515
Gma09g01671 669 MobiDBLite consensus disorder prediction 238 258 - -
Gma09g01671 669 CDD PB1_UP2 47 146 - -
Gma09g01671 669 Gene3D - 63 147 - -
Gma09g01671 669 MobiDBLite consensus disorder prediction 653 669 - -
Gma09g01671 669 SMART PB1_new 58 148 IPR000270 GO:0005515
Gma09g01671 669 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01671 Gma-Chr9 42262109 42264401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01671 42 209 MAP Kinase Kinase Kinase AT1G79570 37.778 4.67e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01671 - - gmx:100797907 1178.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01671 09 42262109 42264401 Gma09g01671 09 42262109 42264401 ECH