Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01662 ATGAGCGAAAGCACAGAGACCCAGAAGCGCCAAGCTGCTGATTCAGAGAGCAAGGAGAATGCTGTTGCTTCCAAGAAACCAAAGGTCGAATCTTGTGGAACGGGTACCGATGGTAATGCCGTAAAGAAACCATCTTTCCTCATTGAAGCTGATGCAGCTGAAGATAAGGGCGCCAGGCACACCATGGAGGATGCGTCCGTCATGCTTCTTGACGCAAGTTTAGATTACCCTGGAAATTTGAGATGTGCACACTTTGCTATTTATGATGGACATGGAGGCCGGTTAGCTGCAGAATATGCTCAAAAGCATTTGCATCGGAATGTTCTTTCAGCAGGATTACCACGTGAGTTGTTTGATGCAAAGGAAGCTAGACGAGCTATTTTGAATGGTTTCCTTAAAACTGATGAGTCTCTTCTTCAAGAAAGTGCTGAAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTTTGGGTATTGGGACAAAGAGTTGTGGTTGCAAATTTAGGAGATGCCAAGGCAGTATTAGCTCGGTCAACTGATGGATCCCAAAACCACCCAGATGGTGTCCAGACACAGCTGAAGGCCATTGTTTTGACTAGAGAACACAAACCTATCTTCCCACTGGAGCGTGCACGCATTGAGAAGGCAGGTGGTTTTGTGTGCCCAGATGGACGATTACTAGCACGTCTAGAAATTTCTAGGGCTTTTGGAGATCGCCAATTCAAAAAGGTGGGTGTTGTTGCAACCCCAGATATATATAATTTTGAAGTTAATAATACAGAGCATTTCATCATTCTTGGCTGTGATGGTTTGTGGGGGGTATTTGGTCCCAGTGATGCTGTTGATTTTGTTCAGAAGTTATTGAATGAGGGGCTACCTGTTGCCACAGTGAGCCGTCGTCTTGTAAGGGAGGCTGTTCGTGAGCGTCGCTGTAAAGATAACTGCTCTGCCATTATCATTGTATTCAAGCACAATTAA 978 0.456 MSESTETQKRQAADSESKENAVASKKPKVESCGTGTDGNAVKKPSFLIEADAAEDKGARHTMEDASVMLLDASLDYPGNLRCAHFAIYDGHGGRLAAEYAQKHLHRNVLSAGLPRELFDAKEARRAILNGFLKTDESLLQESAEGGWQDGATAVCVWVLGQRVVVANLGDAKAVLARSTDGSQNHPDGVQTQLKAIVLTREHKPIFPLERARIEKAGGFVCPDGRLLARLEISRAFGDRQFKKVGVVATPDIYNFEVNNTEHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVATVSRRLVREAVRERRCKDNCSAIIIVFKHN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01662 325 SUPERFAMILY PP2C-like 46 323 IPR036457 -
Gma09g01662 325 PANTHER PROTEIN PHOSPHATASE 2C 8 319 IPR015655 GO:0004722|GO:0006470
Gma09g01662 325 CDD PP2Cc 53 322 IPR001932 -
Gma09g01662 325 Pfam Protein phosphatase 2C 52 310 IPR001932 -
Gma09g01662 325 MobiDBLite consensus disorder prediction 9 25 - -
Gma09g01662 325 ProSiteProfiles PPM-type phosphatase domain profile. 49 322 IPR001932 -
Gma09g01662 325 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 8 319 - -
Gma09g01662 325 MobiDBLite consensus disorder prediction 1 39 - -
Gma09g01662 325 SMART PP2C_4 38 320 IPR001932 -
Gma09g01662 325 Gene3D - 36 325 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01662 Gma-Chr9 42133361 42138296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01662 10 274 PP2C-type Phosphatase Gene Family AT1G18030 62.807 1.87e-119 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01662 K17500 - gmx:100815852 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01662 09 42133361 42138296 Gma09g01662 09 42133361 42138296 ECH
Gma07g00899 07 9754374 9757816 Gma09g01662 09 42133361 42138296 GST